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| | Issue Date | Title | Contributor(s) | Type | Cat. |
| 1 | 2019 | Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data | Romagnoni, A; Jegou, S; VAN STEEN, Kristel; Wainrib, G; Hugot, JP; Peyrin-Biroulet, L; Chamaillard, M; Colombel, JF; Cottone, M; D'Amato, M; D'Inca, R; Halfvarson, J; Henderson, P; Karban, A; Kennedy, NA; Khan, MA; Lemann, M; Levine, A; Massey, D; Milla, M; Ng, SME; Oikonomou, I; Peeters, H; Proctor, DD; Rahier, JF; Rutgeerts, P; Seibold, F; Stronati, L; Taylor, KM; Torkvist, L; Ublick, K; Van Limbergen, J; Van Gossum, A; Vatn, MH; Zhang, H; Zhang, W; Andrews, JM; Bampton, PA; Barclay, M; Florin, TH; Gearry, R; Krishnaprasad, K; Lawrance, IC; Mahy, G; Montgomery, GW; Radford-Smith, G; Roberts, RL; Simms, LA; Hanigan, K; Croft, A; Amininijad, L; Cleynen, I; Dewit, O; Franchimont, D; Georges, M; Laukens, D; Theatre, E; Vermeire, S; Aumais, G; Baidoo, L; Barrie, AM; Beck, K; Bernard, EJ; Binion, DG; Bitton, A; Brant, SR; Cho, JH; Cohen, A; Croitoru, K; Daly, MJ; Datta, LW; Deslandres, C; Duerr, RH; Dutridge, D; Ferguson, J; Fultz, J; Goyette, P; Greenberg, GR; Haritunians, T; Jobin, G; Katz, S; Lahaie, RG; McGovern, DP; Nelson, L; Ng, SM; Ning, K; Pare, P; Regueiro, MD; Rioux, JD; Ruggiero, E; Schumm, LP; Schwartz, M; Scott, R; Sharma, Y; Silverberg, MS; Spears, D; Steinhart, AH; Stempak, JM; Swoger, JM; Tsagarelis, C; Zhang, C; Zhao, HY; AERTS, Jan; Ahmad, T; Arbury, H; Attwood, A; Auton, A; Ball, SG; Balmforth, AJ; Barnes, C; Barrett, JC; Barroso, I; Barton, A; Bennett, AJ; Bhaskar, S; Blaszczyk, K; Bowes, J; Brand, OJ; Braund, PS; Bredin, F; Breen, G; Brown, MJ; Bruce, IN; Bull, J; Burren, OS; Burton, J; Byrnes, J; Caesar, S; Cardin, N; Clee, CM; Coffey, AJ; Mc Connell, J; Conrad, DF; Cooper, JD; Dominiczak, AF; Downes, K; Drummond, HE; Dudakia, D; Dunham, A; Ebbs, B; Eccles, D; Edkins, S; Edwards, C; Elliot, A; Emery, P; Evans, DM; Evans, G; Eyre, S; Farmer, A; Ferrier, IN; Flynn, E; Forbes, A; Forty, L; Franklyn, JA; Frayling, TM; Freathy, RM; Giannoulatou, E; Gibbs, P; Gilbert, P; Gordon-Smith, K; Gray, E; Green, E; Groves, CJ; Grozeva, D; Gwilliam, R; Hall, A; Hammond, N; Hardy, M; Harrison, P; Hassanali, N; Hebaishi, H; Hines, S; Hinks, A; Hitman, GA; Hocking, L; Holmes, C; Howard, E; Howard, P; Howson, JMM; Hughes, D; Hunt, S; Isaacs, JD; Jain, M; Jewell, DP; Johnson, T; Jolley, JD; Jones, IR; Jones, LA; Kirov, G; Langford, CF; Lango-Allen, H; Lathrop, GM; Lee, J; Lee, KL; Lees, C; Lewis, K; Lindgren, CM; Maisuria-Armer, M; Maller, J; Mansfield, J; Marchini, JL; Martin, P; Massey, DCO; McArdle, WL; McGuffin, P; McLay, KE; McVean, G; Mentzer, A; Mimmack, ML; Morgan, AE; Morris, AP; Mowat, C; Munroe, PB; Myers, S; Newman, W; Nimmo, ER; O'Donovan, MC; Onipinla, A; Ovington, NR; Owen, MJ; Palin, K; Palotie, A; Parnell, K; Pearson, R; Pernet, D; Perry, JRB; Phillips, A; Plagnol, V; Prescott, NJ; Prokopenko, I; Quail, MA; Rafelt, S; Rayner, NW; Reid, DM; Renwick, A; Ring, SM; Robertson, N; Robson, S; Russell, E; St Clair, D; Sambrook, JG; Sanderson, JD; Sawcer, SJ; Schuilenburg, H; Scott, CE; Seal, S; Shaw-Hawkins, S; Shields, BM; Simmonds, MJ; Smyth, DJ; Somaskantharajah, E; Spanova, K; Steer, S; Stephens, J; Stevens, HE; Stirrups, K; Stone, MA; Strachan, DP; Su, Z; Symmons, DPM; Thompson, JR; Thomson, W; Tobin, MD; Travers, ME; Turnbull, C; Vukcevic, D; Wain, LV; Walker, M; Walker, NM; Wallace, C; Warren-Perry, M; Watkins, NA; Webster, J; Weedon, MN; Wilson, AG; Woodburn, M; Wordsworth, BP; Yau, C; Young, AH; Zeggini, E; Brown, MA; Burton, PR; Caulfield, MJ; Compston, A; Farrall, M; Gough, SCL; Hall, AS; Hattersley, AT; Hill, AVS; Mathew, CG; Pembrey, M; Satsangi, J; Stratton, MR; Worthington, J; Hurles, ME; Duncanson, A; Ouwehand, WH; Parkes, M; Rahman, N; Todd, JA; Samani, NJ; Kwiatkowski, DP; McCarthy, MI; Craddock, N; Deloukas, P; Donnelly, P; Blackwell, JM; Bramon, E; Casas, JP; Corvin, A; Jankowski, J; Markus, HS; Palmer, CNA; Plomin, R; Rautanen, A; Trembath, RC; Viswanathan, AC; Wood, NW; Spencer, CCA; Band, G; Bellenguez, C; Freeman, C; Hellenthal, G; Pirinen, M; Strange, A; Blackburn, H; Bumpstead, SJ; Dronov, S; Gillman, M; Jayakumar, A; McCann, OT; Liddle, J; Potter, SC; Ravindrarajah, R; Ricketts, M; Waller, M; Weston, P; Widaa, S; Whittaker, P | Journal Contribution | A1 |
| 2 | 2019 | Unifying the framework of Multi-Layer Network and Visual Analytics | AERTS, Jan | Journal Contribution | A2 |
| 3 | 2019 | Predicting disease-causing variant combinations | Papadimitriou, Sofia; Gazzo, Andrea; Versbraegen, Nassim; Nachtegael, Charlotte; AERTS, Jan; Moreau, Yves; Van Dooren, Sonia; Nowe, Ann; Smits, Guillaume; Lenaerts, Tom | Journal Contribution | A1 |
| 4 | 2019 | Slow Digital Art History in Action: Project Cornelia's Computational Approach to Seventeenth-century Flemish Creative Communities | BROSENS, Kris; AERTS, Jan; Alen, K; Beerens, RJ; Cardoso, B; De Prekel, I; IVANOVA, Anna; Lamqaddam, H; MOLENBERGHS, Geert; Slegten, A; Truyen, F; Van der Stighelen, K; Verbert, K | Journal Contribution | A1 |
| 5 | 2018 | Visualization of Biological Data - Crossroads (Dagstuhl Seminar 18161) | AERTS, Jan; Gehlenborg, Nils; Marai, Georgeta Elisabeta; Nieselt, Kay Katja | Journal Contribution | A2 |
| 6 | 2018 | Op maat matchen. Een wicked probleem dat een innovatieve aanpak vraagt | AERTS, Jan | Journal Contribution | A3 |
| 7 | 2018 | Introducing evolutionary biologists to the analysis of big data: guidelines to organize extended bioinformatics training courses | Faria, Rui; Triant, Deborah; Perdomo-Sabogal, Alvaro; Overduin, Bert; Bleidorn, Christoph; Santana, Clara Isabel Bermudez; Langenberger, David; Dall’Olio, Giovanni Marco; Indrischek, Henrike; AERTS, Jan; Engelhardt, Jan; Engelken, Johannes; Liebal, Katja; Fasold, Mario; Robb, Sofia; Grath, Sonja; Kolora, Sree Rohit Raj; Carvalho, Tiago; Salzburger, Walter; Jovanovic, Vladimir; Nowick, Katja | Journal Contribution | A2 |
| 8 | 2018 | Haplotying and copy-number profiling of single cells by massive parallel sequencing | Masset, H; Esteki, M Zamani; Dimitriadou, E; Melotte, C; Debrock, S; Peeraer, K; Ardeshirdavani, A; Alcaide, D; Sifrim, A; AERTS, Jan; Moreau, Y; Voet, T; Vermeesch, JR | Journal Contribution | M |
| 9 | 2018 | When the tech kids are running too fast: Data visualisation through the lens of art history research | AERTS, Jan | Journal Contribution | A1 |
| 10 | 2018 | GRNBoost2 and Arboreto: efficient and scalable inference of gene regulatory networks | Moerman, T; Santos, SA; Gonzalez-Blas, CB; Simm, J; Moreau, Y; AERTS, Jan; Aerts, S; Kelso, Janet | Journal Contribution | A1 |
| 11 | 2017 | VISUALIZING AND ANALYZING COMPLEX AND DYNAMIC NETWORKS OF FLEMISH TAPESTRY ENTREPRENEURS (1640-1720) | Brosens, K; AERTS, Jan; Alen, K; Slegten, A; Truyen, F | Journal Contribution | A1 |
| 12 | 2017 | SCENIC: single-cell regulatory network inference and clustering | Sara Aibar; Carmen Bravo González-Blas; Thomas Moerman; Vân Anh Huynh-Thu; Hana Imrichova; Gert Hulselmans; Florian Rambow; Jean-Christophe Marine; Pierre Geurts; AERTS, Jan; Joost van den Oord; Zeynep Kalender Atak; Jasper Wouters; Stein Aerts | Journal Contribution | A1 |
| 13 | 2016 | Visual anomaly detection in spatio-temporal data using element-specific references | Alcaide, D; Thiyagarajan, J; Lamqaddam, H; Vilaplana, JN; AERTS, Jan | Journal Contribution | A3 |
| 14 | 2016 | A Method to Exploit the Structure of Genetic Ancestry Space to Enhance Case-Control Studies | Bodea, C.A.; Neale, B.M.; Ripke, S.; Barclay, M.; Peyrin-Biroulet, L.; Chamaillard, M.; Colombel, J.-F.; Cottone, M.; Croft, A.; D'Incà, R.; Halfvarson, J.; Hanigan, K.; Henderson, P.; Hugot, J.-P.; Karban, A.; Kennedy, N.A.; Khan, M.A.; Lémann, M.; Levine, A.; Massey, D.; Milla, M.; Montgomery, G.W.; Ng, S.M.E.; Oikonomou, I.; Peeters, H.; Proctor, D.D.; Rahier, J.-F.; Roberts, R.; Rutgeerts, P.; Seibold, F.; Stronati, L.; Taylor, K.M.; Törkvist, L.; Ublick, K.; Van Limbergen, J.; Van Gossum, A.; Vatn, M.H.; Zhang, H.; Zhang, W.; Andrews, J.M.; Bampton, P.A.; Florin, T.H.; Gearry, R.; Krishnaprasad, K.; Lawrance, I.C.; Mahy, G.; Radford-Smith, G.; Roberts, R.L.; Simms, L.A.; Amininijad, L.; Cleynen, I.; Dewit, O.; Franchimont, D.; Georges, M.; Laukens, D.; Theatre, E.; Vermeire, S.; Aumais, G.; Baidoo, L.; Barrie, A.M.; Beck, K.; Bernard, E.-J.; Binion, D.G.; Bitton, A.; Brant, S.R.; Cho, J.H.; Cohen, A.; Croitoru, K.; Datta, L.W.; Deslandres, C.; Duerr, R.H.; Dutridge, D.; Ferguson, J.; Fultz, J.; Goyette, P.; Greenberg, G.R.; Haritunians, T.; Jobin, G.; Katz, S.; Lahaie, R.G.; McGovern, D.P.; Nelson, L.; Ng, S.M.; Ning, K.; Paré, P.; Regueiro, M.D.; Rioux, J.D.; Ruggiero, E.; Schumm, L.P.; Schwartz, M.; Scott, R.; Sharma, Y.; Silverberg, M.S.; Spears, D.; Steinhart, A.H.; Stempak, J.M.; Swoger, J.M.; Tsagarelis, C.; Zhang, C.; Zhao, H.; Ahmad, T.; Arbury, H.; AERTS, Jan; Attwood, A.; Auton, A.; Ball, S.G.; Balmforth, A.J.; Barnes, C.; Barrett, J.C.; Barroso, I.; Barton, A.; Bennett, A.J.; Bhaskar, S.; Blaszczyk, K.; Bowes, J.; Brand, O.J.; Braund, P.S.; Bredin, F.; Breen, G.; Brown, M.J.; Bruce, I.N.; Bull, J.; Burren, O.S.; Burton, J.; Byrnes, J.; Caesar, S.; Cardin, N.; Clee, C.M.; Coffey, A.J.; Connell, J.M.C.; Conrad, D.F.; Cooper, J.D.; Dominiczak, A.F.; Downes, K.; Drummond, H.E.; Dudakia, D.; Dunham, A.; Ebbs, B.; Eccles, D.; Edkins, S.; Edwards, C.; Elliot, A.; Emery, P.; Evans, D.M.; Evans, G.; Eyre, S.; Farmer, A.; Ferrier, N.; Flynn, E.; Forbes, A.; Forty, L.; Franklyn, J.A.; Frayling, T.M.; Freathy, R.M.; Giannoulatou, E.; Gibbs, P.; Gilbert, P.; Gordon-Smith, K.; Gray, E.; Green, E.; Groves, C.J.; Grozeva, D.; Gwilliam, R.; Hall, A.; Hammond, N.; Hardy, M.; Harrison, P.; Hassanali, N.; Hebaishi, H.; Hines, S.; Hinks, A.; Hitman, G.A.; Hocking, L.; Holmes, C.; Howard, E.; Howard, P.; Howson, J.M.M.; Hughes, D.; Hunt, S.; Isaacs, J.D.; Jain, M.; Jewell, D.P.; Johnson, T.; Jolley, J.D.; Jones, I.R.; Jones, L.A.; Kirov, G.; Langford, C.F.; Lango-Allen, H.; Lathrop, G.M.; Lee, J.; Lee, K.L.; Lees, C.; Lewis, K.; Lindgren, C.M.; Maisuria-Armer, M.; Maller, J.; Mansfield, J.; Marchini, J.L.; Martin, P.; Massey, D.C.O.; McArdle, W.L.; McGuffin, P.; McLay, K.E.; McVean, G.; Mentzer, A.; Mimmack, M.L.; Morgan, A.E.; Morris, A.P.; Mowat, C.; Munroe, P.B.; Myers, S.; Newman, W.; Nimmo, E.R.; O'Donovan, M.C.; Onipinla, A.; Ovington, N.R.; Owen, M.J.; Palin, K.; Palotie, A.; Parnell, K.; Pearson, R.; Pernet, D.; Perry, J.R.B.; Phillips, A.; Plagnol, V.; Prescott, N.J.; Prokopenko, I.; Quail, M.A.; Rafelt, S.; Rayner, N.W.; Reid, D.M.; Renwick, A.; Ring, S.M.; Robertson, N.; Robson, S.; Russell, E.; St Clair, D.; Sambrook, J.G.; Sanderson, J.D.; Sawcer, S.J.; Schuilenburg, H.; Scott, C.E.; Seal, S.; Shaw-Hawkins, S.; Shields, B.M.; Simmonds, M.J.; Smyth, D.J.; Somaskantharajah, E.; Spanova, K.; Steer, S.; Stephens, J.; Stevens, H.E.; Stirrups, K.; Stone, M.A.; Strachan, D.P.; Su, Z.; Symmons, D.P.M.; Thompson, J.R.; Thomson, W.; Tobin, M.D.; Travers, M.E.; Turnbull, C.; Vukcevic, D.; Wain, L.V.; Walker, M.; Walker, N.M.; Wallace, C.; Warren-Perry, M.; Watkins, N.A.; Webster, J.; Weedon, M.N.; Wilson, A.G.; Woodburn, M.; Wordsworth, B.P.; Yau, C.; Young, A.H.; Zeggini, E.; Brown, M.A.; Burton, P.R.; Caulfield, M.J.; Compston, A.; Farrall, M.; Gough, S.C.L.; Hall, A.S.; Hattersley, A.T.; Hill, A.V.S.; Mathew, C.G.; Pembrey, M.; Satsangi, J.; Stratton, M.R.; Worthington, J.; Hurles, M.E.; Duncanson, A.; Ouwehand, W.H.; Parkes, M.; Rahman, N.; Todd, J.A.; Samani, N.J.; Kwiatkowski, D.P.; McCarthy, M.I.; Craddock, N.; Deloukas, P.; Donnelly, P.; Blackwell, J.M.; Bramon, E.; Casas, J.P.; Corvin, A.; Jankowski, J.; Markus, H.S.; Palmer, C.N.A.; Plomin, R.; Rautanen, A.; Trembath, R.C.; Viswanathan, A.C.; Wood, N.W.; Spencer, C.C.A.; Band, G.; Bellenguez, C.; Freeman, C.; Hellenthal, G.; Pirinen, M.; Strange, A.; Blackburn, H.; Bumpstead, S.J.; Dronov, S.; Gillman, M.; Jayakumar, A.; McCann, O.T.; Liddle, J.; Potter, S.C.; Ravindrarajah, R.; Ricketts, M.; Waller, M.; Weston, P.; Widaa, S.; Whittaker, P.; Daly, M.J.; Devlin, B.; Roeder, K. | Journal Contribution | A1 |
| 15 | 2016 | Erratum: Assessing transmissibility of HIV-1 drug resistance mutations from treated and from drug-naive individuals (AIDS (2015) 29 (2045-2052)) | Winand, R.; Theys, K.; Eusébio, M.; AERTS, Jan; Camacho, R.J.; Gomes, P. | Journal Contribution | M |
| 16 | 2016 | Candidate gene prioritization with Endeavour | Tranchevent, Léon-Charles; Ardeshirdavani, Amin; ElShal, Sarah; ALCAIDE VILLAR, Daniel; AERTS, Jan; Auboeuf, Didier; Moreau, Yves | Journal Contribution | A1 |
| 17 | 2015 | Assessing transmissibility of HIV-1 drug resistance mutations from treated and from drug-naive individuals | Winand, R; Theys, K; Eusebio, M; AERTS, Jan; Camacho, RJ; Gomes, P; Suchard, MA; Vandamme, AM; Abecasis, AB | Journal Contribution | A1 |
| 18 | 2015 | Art meets science: The Cosmopolitan Chicken Research Project | Stinckens, A; Vereijken, A; Ons, E; Konings, P; Van As, P; Cuppens, H; Moreau, Y; Sakai, R; AERTS, Jan; Goddeeris, B; Buys, N; Vanmechelen, K; Cassiman, JJ | Journal Contribution | A1 |
| 19 | 2015 | Erratum: Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network (Nature Communications (2014) 5 (4868) DOI: 10.1038/ncomms5868) | Pougach, K.; Voet, A.; Kondrashov, F.A.; Voordeckers, K.; Christiaens, J.F.; Baying, B.; Benes, V.; Sakai, R.; AERTS, Jan; Zhu, B.; Van Dijck, P.; Verstrepen, K.J. | Journal Contribution | M |
| 20 | 2014 | dendsort: modular leaf ordering methods for dendrogram representations in R | Sakai, Ryo; Winand, Raf; Verbeiren, Toni; Moere, Andrew Vande; AERTS, Jan | Journal Contribution | A3 |
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