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Title: | Global patterns in endemicity and vulnerability of soil fungi - superecoregions and endemicity | Data Creator - person: | Tedersoo, Leho Mikryukov, Vladimir Zizka, Alexander d Bahram, Mohamma Hagh- Doust, Niloufar Anslan, Stan Prylutskyi, Oleh Delgado- Baquerizo, Manuel T. Maestre, Fernando Pärn, Jaan Öpik, Maarja SOUDZILOVSKAIA, Nadia Antonelli, Alexandre Kõljalg, Urmas Abarenkov, Kessy Moora, Mari Zobel, Martin Espenberg, Mikk Mander, Ulo Khalid, Abdul Nasir Corrales, Adriana Agan, Atho Vasco- Palacios, Aída -M. Saitta, Alessandro Rinaldi, Andrea C. Verbeken, Annemieke Sulistyo, Bobby P. Tamgnoue, Boris Furneaux, Brendan Duarte Ritter, Camilla Nyamukondiwa, Casper Sharp, Cathy Marín, César Gohar, Daniyal Klavina, Darta Sharmah, Dipon Dai, Dong Qin Nouhra, Eduardo Biersma, Elisabeth Mechteld Rähn, Elisabeth Cameron, Erin K. De Crop, Eske Otsing, Eveli Davydov, Evgeny A. Albornoz, Felipe E. Brearley, Francis Q. Buegger, Franz Zahn, Geoffrey Bonito, Gregory Hiiesalu, Inga Barrio, Isabel C. Heilmann- Clausen, Jacob Ankuda, Jelena Kupagme, John Y. Maciá- Vicente, Jose G Djeugap Fovo, Joseph Geml, József Alatalo, Juha M. Alvarez- Manjarrez, Julieta Põldmaa, Kadri Runnel, Kadri Adamson, Kalev Bråthen, Kari Anne Pritsch, Karin Tchan, Kassim I. Armolaitis, Kęstutis Hyde, Kevin D. Newsham, Kevin K. Panksep, Kristel Lateef, Adebola A. Tiirmann, Liis Hansson, Linda Lamit, Louis J. Saba, Malka Tuomi, Maria Gryzenhout, Marieka Bauters, Marijn Piepenbring, Meike Wijayawardene, Nalin Yorou, Nourou S. Kurina, Olavi Mortimer, Peter E. Meidl, Peter Kohout, Petr Nilsson, R. Henrik Puusepp, Rasmus Drenkhan, Rein Garibay- Orijel, Roberto Godoy, Roberto Alkahtani, Saad Rahimlou, Saleh Dudov, Sergey V. Põlme, Sergei Ghosh, Soumya Mundra, Sunil Ahmed, Talaat Netherway, Tarquin Henkel, Terry W. Roslin, Thomas Nteziryayo, Vincent Fedosov, Vladimir E Onipchenko, Vladimir G. Yasanthika, W. A. Erandi Lim, Young Woon |
Data Creator - organization: | University of Tartu | Data Curator - person: | Tedersoo, Leho | Data Curator - organization: | University of Tartu | Rights Holder - person: | Tedersoo, Leho | Rights Holder - organization: | University of Tartu | Publisher: | Zenodo | Issue Date: | 2022 | Abstract: | This repository contains additional data associated to Tedersoo et al. (2022) (https://doi.org/10.1111/gcb.16398).This repository contains those data necessary to rerun the superecoregion design and the endemicity analyses as well as vector maps on the endemicity and OTU richness of individual superecoregions. Further data associated with the same publication, regarding the vulnerability analysis, can be found here: 10.5281/zenodo.6983158. input.zip - Input data needed to run the analysis scripts provided [here](https://github.com/Mycology-Microbiology-Center/Fungal_Endemicity_and_Vulnerability/superecoregions_and_endemicity). The entire folder is to be copied in the working directory to run the pipeline. output.zip - Further data needed to run the analysis scripts provided [here](https://github.com/Mycology-Microbiology-Center/Fungal_Endemicity_and_Vulnerability/superecoregions_and_endemicity). The entire folder is to be copied in the working directory to run the pipeline. maps_otu_numbers_and_se_characteristics - vector maps of the superecoregions and the number of OTUs and endemic OTUs per region for different functional groups maps_traits_endemism - vector maps of endemicity indices per region f different functional groups 01_super_Ecoregions_numbers.pdf - vector map of the superecoregions used in the study numbered from 1 - 174. legend_01_super_ecoregions_numbers.csv - legend with superecoregion names for 01_super_Ecoregions_numbers.pdf. super_eoregions_results - Superecoregions with number of OTUs, number of endemic OTUs and endemicity indices in R data format, for further analyses and visualization super_ecoregions.shp - Superecoregions with number of OTUs, number of endemic OTUs and endemicity indices as shape file, for further analyses and visualization | Research Discipline: | Natural sciences > Biological sciences > Microbiology > Mycology (01060804) | Keywords: | fungi;diversity;endemicity;global change vulnerability;conservation priorities;metabarcoding;GIS;climate change;global maps;biogeography;mycorrhizal fungi;pathogens;saprotrophs | DOI: | 10.5281/zenodo.7027315 | Link to publication/dataset: | https://zenodo.org/record/7027315 | Source: | Zenodo. 10.5281/zenodo.7027315 https://zenodo.org/record/7027315 | Publications related to the dataset: | 10.1111/gcb.16398 | License: | Creative Commons Attribution 4.0 International (CC-BY-4.0) | Access Rights: | Open Access | Version: | 1.0 | Category: | DS | Type: | Dataset |
Appears in Collections: | Datasets |
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