Please use this identifier to cite or link to this item: http://hdl.handle.net/1942/45672
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dc.date.accessioned2025-03-18T09:24:52Z-
dc.date.available2025-03-18T09:24:52Z-
dc.date.issued2025-
dc.date.submitted2025-03-18T09:24:21Z-
dc.identifier.citationZenodo. 10.5281/zenodo.14908112.-
dc.identifier.urihttp://hdl.handle.net/1942/45672-
dc.description.abstractWe illustrate the use of different implementations of the hierarchical NB model by using a dataset obtained from an RNA-seq experiment Bouquet et al. [2016]. The raw data are publicly available under GEO accession number GSE63085. This is a processed dataset which contains 137,078 exons with a nonzero sum of counts across all samples, grouped into 18,765 protein-coding genes, were included in the analysis. Related works: J Bouquet, MJ Soloski, A Swei, C Cheadle, S Federman, JN Billaud, AW Rebman, B Kabre, R Halpert, M Boorgula, JN Aucott, and CY Chiu. Longitudinal transcriptome analysis reveals a sustained differential gene expression signature in patients treated for acute Lyme disease. mBio, 7(1):e00100–16, 2016.-
dc.language.isoen-
dc.publisherZenodo-
dc.subject.classificationComputational evolutionary biology, comparative genomics and population genomics-
dc.subject.otherlyme disease-
dc.subject.otherexon counts-
dc.subject.othergene expression-
dc.titleProcessed exon counts from Lyme disease study (GEO accession number GSE63085)-
dc.typeDataset-
local.bibliographicCitation.jcatDS-
dc.description.versionv1-
dc.rights.licenseCreative Commons Attribution 4.0 International (CC-BY-4.0)-
dc.identifier.doi10.5281/zenodo.14908112.-
dc.description.otherWe illustrate the use of different implementations of the hierarchical NB model by using a dataset obtained from an RNA-seq experiment Bouquet et al. [2016]. The raw data are publicly available under GEO accession number GSE63085. This is a processed dataset which contains 137,078 exons with a nonzero sum of counts across all samples, grouped into 18,765 protein-coding genes, were included in the analysis. Related works: J Bouquet, MJ Soloski, A Swei, C Cheadle, S Federman, JN Billaud, AW Rebman, B Kabre, R Halpert, M Boorgula, JN Aucott, and CY Chiu. Longitudinal transcriptome analysis reveals a sustained differential gene expression signature in patients treated for acute Lyme disease. mBio, 7(1):e00100–16, 2016.-
local.uhasselt.internationalno-
local.contributor.datacreatorGORCZAK, Katarzyna-
local.contributor.datacuratorGORCZAK, Katarzyna-
local.contributor.rightsholderGORCZAK, Katarzyna-
local.format.extent34.5 Mb-
local.format.mimetypetxt-
local.contributingorg.datacreatorHasselt University-
local.contributingorg.datacuratorHasselt University-
local.contributingorg.rightsholderHasselt University-
dc.rights.accessOpen Access-
item.contributorGORCZAK, Katarzyna-
item.fullcitationGORCZAK, Katarzyna (2025) Processed exon counts from Lyme disease study (GEO accession number GSE63085). Zenodo. 10.5281/zenodo.14908112..-
item.fulltextNo Fulltext-
item.accessRightsClosed Access-
crisitem.license.codeCC-BY-4.0-
crisitem.license.nameCreative Commons Attribution 4.0 International (CC-BY-4.0)-
crisitem.discipline.code01060305-
crisitem.discipline.nameComputational evolutionary biology, comparative genomics and population genomics-
crisitem.discipline.pathNatural sciences > Biological sciences > Bioinformatics and computational biology > Computational evolutionary biology, comparative genomics and population genomics-
crisitem.discipline.pathandcodeNatural sciences > Biological sciences > Bioinformatics and computational biology > Computational evolutionary biology, comparative genomics and population genomics (01060305)-
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