Please use this identifier to cite or link to this item: http://hdl.handle.net/1942/23913
Title: Improving Operational Intensity in Data Bound Markov Chain Monte Carlo
Authors: NEMETH, Balazs 
HABER, Tom 
Ashby, Thomas J.
LAMOTTE, Wim 
Issue Date: 2017
Publisher: Elsevier Science BV
Source: Koumoutsakos, Petros; Lees, Michael; Krzhizhanovskaya, Valeria; Dongarra, Kack; Sloot, Peter (Ed.). International Conference on Computational Science, ICCS 2017, 12-14 June 2017, Zurich, Switzerland, Elsevier Science BV, p. 2348-2352
Series/Report: Procedia Computer Science
Series/Report no.: 108
Abstract: Typically, parallel algorithms are developed to leverage the processing power of multiple processors simultaneously speeding up overall execution. At the same time, discrepancy between \{DRAM\} bandwidth and microprocessor speed hinders reaching peak performance. This paper explores how operational intensity improves by performing useful computation during otherwise stalled cycles. While the proposed methodology is applicable to a wide variety of parallel algorithms, and at different scales, the concepts are demonstrated in the machine learning context. Performance improvements are shown for Bayesian logistic regression with a Markov chain Monte Carlo sampler, either with multiple chains or with multiple proposals, on a dense data set two orders of magnitude larger than the last level cache on contemporary systems.
Keywords: Operational intensity;MCMC;Bayesian logistic regression;HPC;Big Data
Document URI: http://hdl.handle.net/1942/23913
Link to publication/dataset: http://www.sciencedirect.com/science/article/pii/S1877050917305252
DOI: 10.1016/j.procs.2017.05.024
ISI #: 000404959000249
Rights: 2017 The Authors. Published by Elsevier B.V. Peer-review under responsibility of the scientific committee of the International Conference on Computational Science
Category: C1
Type: Proceedings Paper
Validations: ecoom 2018
Appears in Collections:Research publications

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