Please use this identifier to cite or link to this item: http://hdl.handle.net/1942/49991
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dc.date.accessioned2026-09-04T08:38:37Z-
dc.date.available2026-09-04T08:38:37Z-
dc.date.issued2026-
dc.date.submitted2026-09-04T08:36:02Z-
dc.identifier.citationZenodo. 10.5281/zenodo.18613413 https://zenodo.org/doi/10.5281/zenodo.18613413-
dc.identifier.urihttp://hdl.handle.net/1942/49991-
dc.description.abstractResults of using the spatialstein pipeline on two publicly available data sets: mouse bladder (PRIDE database ID: PXD001283) and mouse cerebellum (MetaboLights database ID: MTBLS487). Details on how to download the raw data sets can be found on the project's GitHub website linked to this data. The files contain the lists of annotated lipid ions, deconvolved ion images of these ions, and segmentation maps.-
dc.description.sponsorshipThe rules of miRNA-target interactions. European Commission. awardNumber:101244218. 10.13039/501100000780-
dc.description.sponsorshipBioinformatics for Genomics in Malta. European Commission. awardNumber:101086768. 10.13039/501100000780-
dc.description.sponsorshipOptimal-transport based algorithms for Mass Spectrometry and NMR . National Science Centre. awardNumber:2021/41/B/ST6/03526. 10.13039/501100004281-
dc.language.isoen-
dc.publisherZenodo-
dc.subject.classification01060307-
dc.subject.otherSegmentation of Mass Spectrometry-
dc.titlespatialstein: An Open-Source Workflow for Annotation, Deconvolution, and Spatially Aware Segmentation of Mass Spectrometry Imaging Data-
dc.typeDataset-
local.bibliographicCitation.jcatDS-
dc.rights.licenseCreative Commons Attribution 4.0 International (CC-BY-4.0)-
dc.identifier.doi10.5281/zenodo.18613413-
dc.identifier.urlhttps://zenodo.org/doi/10.5281/zenodo.18613413-
local.provider.typedatacite-
local.uhasselt.internationalyes-
local.contributor.datacreatorCiach, Michał Aleksander-
local.contributor.datacreatorGuo, Dan-
local.contributor.datacreatorBemis, Kylie Ariel-
local.contributor.datacreatorVALKENBORG, Dirk-
local.contributor.datacreatorVitek, Olga-
local.contributor.datacreatorGambin, Anna-
local.contributor.rightsholderCiach, Michal Aleksander-
local.format.extent95.5 MB-
local.format.mimetypeComma-separated values (CSV)-
local.contributororcid.datacreator0000-0003-4961-7071-
local.contributororcid.datacreator0000-0002-1877-3496-
local.contributororcid.datacreator0000-0003-1728-1104-
local.contributororcid.datacreator0000-0003-3476-3017-
local.contributororcid.rightsholder0000-0003-4961-7071-
local.publication.doi10.1021/acs.analchem.5c04737-
local.publication.handlehttp://hdl.handle.net/1942/48243-
local.contributingorg.datacreatorUniversity of Warsaw-
local.contributingorg.datacreatorUniversity of Malta-
local.contributingorg.rightsholderUniversity of Warsaw-
local.contributingorg.rightsholderUniversity of Malta-
dc.rights.accessOpen Access-
item.contributorCiach, Michał Aleksander-
item.contributorGuo, Dan-
item.contributorBemis, Kylie Ariel-
item.contributorVALKENBORG, Dirk-
item.contributorVitek, Olga-
item.contributorGambin, Anna-
item.contributorCiach, Michal Aleksander-
item.accessRightsClosed Access-
item.fullcitationCiach, Michał Aleksander; Guo, Dan; Bemis, Kylie Ariel; VALKENBORG, Dirk; Vitek, Olga & Gambin, Anna (2026) spatialstein: An Open-Source Workflow for Annotation, Deconvolution, and Spatially Aware Segmentation of Mass Spectrometry Imaging Data. Zenodo. 10.5281/zenodo.18613413 https://zenodo.org/doi/10.5281/zenodo.18613413.-
item.fulltextNo Fulltext-
crisitem.license.codeCC-BY-4.0-
crisitem.license.nameCreative Commons Attribution 4.0 International (CC-BY-4.0)-
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