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http://hdl.handle.net/1942/49991| Title: | spatialstein: An Open-Source Workflow for Annotation, Deconvolution, and Spatially Aware Segmentation of Mass Spectrometry Imaging Data | Data Creator - person: | Ciach, Michał Aleksander Guo, Dan Bemis, Kylie Ariel VALKENBORG, Dirk Vitek, Olga Gambin, Anna |
Data Creator - organization: | University of Warsaw University of Malta |
Rights Holder - person: | Ciach, Michal Aleksander | Rights Holder - organization: | University of Warsaw University of Malta |
Publisher: | Zenodo | Issue Date: | 2026 | Abstract: | Results of using the spatialstein pipeline on two publicly available data sets: mouse bladder (PRIDE database ID: PXD001283) and mouse cerebellum (MetaboLights database ID: MTBLS487). Details on how to download the raw data sets can be found on the project's GitHub website linked to this data. The files contain the lists of annotated lipid ions, deconvolved ion images of these ions, and segmentation maps. | Keywords: | Segmentation of Mass Spectrometry | DOI: | 10.5281/zenodo.18613413 | Link to publication/dataset: | https://zenodo.org/doi/10.5281/zenodo.18613413 | Source: | Zenodo. 10.5281/zenodo.18613413 https://zenodo.org/doi/10.5281/zenodo.18613413 | Publications related to the dataset: | 10.1021/acs.analchem.5c04737 | Publications related to the dataset: | http://hdl.handle.net/1942/48243 | License: | Creative Commons Attribution 4.0 International (CC-BY-4.0) | Access Rights: | Open Access | Category: | DS | Type: | Dataset |
| Appears in Collections: | Datasets |
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