VALKENBORG, Dirk

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VALKENBORG, Dirk
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dirk.valkenborg@uhasselt.be
 
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Publications

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Author:  Laukens, Kris

Results 1-20 of 27 (Search time: 0.006 seconds).

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Issue DateTitleContributor(s)TypeCat.
12022Four layer multi-omics reveals molecular responses to aneuploidy in LeishmaniaCuypers, Bart; Meysman, Pieter; Erb, Ionas; Bittremieux, Wout; VALKENBORG, Dirk; Baggerman, Geert; Mertens, Inge; Sundar, Shyam; Khanal, Basudha; Notredame, Cedric; Dujardin, Jean-Claude; Domagalska, Malgorzata A.; Laukens, Kris; Engwerda, Christian R.Journal ContributionA1
22021CONSTANd: An Efficient Normalization Method for Relative Quantification in Small- and Large-Scale Omics Experiments in R BioConductor and PythonVAN HOUTVEN, Joris; HOOYBERGHS, Jef; Laukens, Kris; VALKENBORG, DirkJournal ContributionA1
32021Constrained standardization of count data from massive parallel sequencingVAN HOUTVEN, Joris; Cuypers, Bart; Meysman, Pieter; HOOYBERGHS, Jef; Laukens, Kris; VALKENBORG, DirkPreprintO
42020MESSAR: Automated recommendation of metabolite substructures from tandem mass spectraLiu, Youzhong; Mrzic, Aida; Meysman, Pieter; De Vijlder, Thomas; Romijn, Edwin P.; VALKENBORG, Dirk; Bittremieux, Wout; Laukens, KrisJournal ContributionA1
52020PRiSM: A prototype for exhaustive, restriction-free database searching for mass spectrometry-based identificationVAN HOUTVEN, Joris; Boonen, Kurt; Geert Baggerman, |; Askenazi, Manor; Laukens, Kris; HOOYBERGHS, Jef; VALKENBORG, DirkJournal ContributionA1
62019QCQuan: a web tool for the automated assessment of protein expression and data quality of labeled mass spectrometry experiments.VAN HOUTVEN, Joris; AGTEN, Annelies; Boonen, Kurt; Baggerman, Geert; HOOYBERGHS, Jef; Laukens, Kris; VALKENBORG, DirkJournal ContributionA1
72019MIND: A Double-Linear Model To Accurately Determine Monoisotopic Precursor Mass in High-Resolution Top-Down ProteomicsLermyte, Frederik; Dittwald, Piotr; CLAESEN, Jurgen; Baggerman, Geert; Sobott, Frank; O'Connor, Peter B.; Laukens, Kris; HOOYBERGHS, Jef; Gambin, Anna; VALKENBORG, DirkJournal ContributionA1
82018Proceedings of the EuBIC developer's meeting 2018Willems, Sander; Bouyssie, David; Deforce, Dieter; Dorfer, Viktoria; Gorshkov, Vladimir; Kopczynski, Dominik; Laukens, Kris; Locard-Paulet, Marie; Schwammle, Veit; Uszkoreit, Julian; VALKENBORG, Dirk; Vaudel, Marc; Bittremieux, WoutJournal ContributionA1
92018A tutorial in small molecule identification via electrospray ionization-mass spectrometry: The practical art of structural elucidationDe Vijlder, Thomas; VALKENBORG, Dirk; Lemiere, Filip; Romijn, Edwin P.; Laukens, Kris; Cuyckens, FilipJournal ContributionA1
102017Computational quality control tools for mass spectrometry proteomicsBittremieux, Wout; VALKENBORG, Dirk; Martens, Lennart; Laukens, KrisJournal ContributionA1
112017InSourcerer: a high-throughput method to search for unknown metabolite modifications by mass spectrometryMrzic, Aida; Lermyte, Frederik; Vu, Trung Nghia; VALKENBORG, Dirk; Laukens, KrisJournal ContributionA1
122016Unsupervised Quality Assessment of Mass Spectrometry Proteomics Experiments by Multivariate Quality Control MetricsBittremieux, Wout; Meysman, Pieter; Martens, Lennart; VALKENBORG, Dirk; Laukens, KrisJournal ContributionA1
132016Designing biomedical proteomics experiments: state-of-the-art and future perspectivesMaes, Evelyne; Kelchtermans, Pieter; Bittremieux, Wout; De Grave, Kurt; Degroeve, Sven; HOOYBERGHS, Jef; Mertens, Inge; Baggerman, Geert; Ramon, Jan; Laukens, Kris; Martens, Lennart; VALKENBORG, DirkJournal ContributionA1
142015A generic approach for "shotgun" analysis of the soluble proteome of plant cell suspension culturesDe Vijlder, Thomas; VALKENBORG, Dirk; Dewaele, Debbie; Remmerie, Noor; Laukens, Kris; Witters, ErwinJournal ContributionA1
152015Protein complex analysis: From raw protein lists to protein interaction networksMeysman, Pieter; Titeca, Kevin; Eyckerman, Sven; Tavernier, Jan; GOETHALS, Bart; Martens, Lennart; VALKENBORG, Dirk; Laukens, KrisJournal ContributionA1
162015iMonDB: Mass Spectrometry Quality Control through Instrument MonitoringBittremieux, Wout; Willems, Hanny; Kelchtermans, Pieter; Martens, Lennart; Laukens, Kris; VALKENBORG, DirkJournal ContributionA1
172015Open-Source, Platform-Independent Library and Online Scripting Environment for Accessing Thermo Scientific RAW FilesKelchtermans, Pieter; Silva, Ana S. C.; Argentini, Andrea; Staes, An; Vandenbussche, Jonathan; Laukens, Kris; VALKENBORG, Dirk; Martens, LennartJournal ContributionA1
182014Towards automated discrimination of lipids versus peptides from full scan mass spectraDittwald, Piotr; Nghia, Vu Trung; Harris, Glenn A.; Caprioli, Richard .M.; Van de Plas, Raf; Laukens, Kris; Gambin, Anna; VALKENBORG, DirkJournal ContributionA1
192014jqcML: An Open-Source Java API for Mass Spectrometry Quality Control Data in the qcML FormatBittremieux, Wout; Kelchtermans, Pieter; VALKENBORG, Dirk; Martens, Lennart; Laukens, KrisJournal ContributionA1
202014Unravelling associations between unassigned mass spectrometry peaks with frequent itemset mining techniquesTrung Nghia, Vu; Mrzic, Aida; VALKENBORG, Dirk; Maes, Evelyne; Lemiere, Filip; GOETHALS, Bart; Laukens, KrisJournal ContributionA1
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