Please use this identifier to cite or link to this item: http://hdl.handle.net/1942/40360
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dc.contributor.authorUleman, Jeroen F.-
dc.contributor.authorMANCINI, Emiliano-
dc.contributor.authorAl-Shama, Rushd F. M.-
dc.contributor.authorte Velde, Anje A.-
dc.contributor.authorKraneveld, Aletta D.-
dc.contributor.authorCastiglione, Filippo-
dc.date.accessioned2023-06-12T08:07:49Z-
dc.date.available2023-06-12T08:07:49Z-
dc.date.issued2023-
dc.date.submitted2023-06-08T14:25:40Z-
dc.identifier.citationMATHEMATICAL BIOSCIENCES, 359 (Art N° 108997)-
dc.identifier.urihttp://hdl.handle.net/1942/40360-
dc.description.abstractDysregulated inflammation underlies various diseases. Specialized pro-resolving mediators (SPMs) like Resolvin D1 (RvD1) have been shown to resolve inflammation and halt disease progression. Macrophages, key immune cells that drive inflammation, respond to the presence of RvD1 by polarizing to an anti-inflammatory type (M2). However, RvD1's mechanisms, roles, and utility are not fully understood. This paper introduces a gene-regulatory network (GRN) model that contains pathways for RvD1 and other SPMs and proinflammatory molecules like lipopolysaccharides. We couple this GRN model to a partial differential equation-agent-based hybrid model using a multiscale framework to simulate an acute inflammatory response with and without the presence of RvD1. We calibrate and validate the model using experimental data from two animal models. The model reproduces the dynamics of key immune components and the effects of RvD1 during acute inflammation. Our results suggest RvD1 can drive macrophage polarization through the G protein-coupled receptor 32 (GRP32) pathway. The presence of RvD1 leads to an earlier and increased M2 polarization, reduced neutrophil recruitment, and faster apoptotic neutrophil clearance. These results support a body of literature that suggests that RvD1 is a promising candidate for promoting the resolution of acute inflammation. We conclude that once calibrated and validated on human data, the model can identify critical sources of uncertainty, which could be further elucidated in biological experiments and assessed for clinical use.-
dc.description.sponsorshipThe authors acknowledge Ksenia Dilevskaya’s work on the literature review that was used to extend the gene-regulatory network model. FC acknowledges partial support from the Institute for Advanced Study (IAS), Universiteit van Amsterdam, The Netherlands. The authors also acknowledge Peter M.A. Sloot for supporting this work at the IAS.-
dc.language.isoen-
dc.publisherELSEVIER SCIENCE INC-
dc.rights2023 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).-
dc.subject.otherMultiscale model-
dc.subject.otherResolvin D1-
dc.subject.otherAcute inflammation-
dc.subject.otherAgent-based model-
dc.subject.otherGene-regulatory network-
dc.subject.otherMacrophage polarization-
dc.titleA multiscale hybrid model for exploring the effect of Resolvin D1 on macrophage polarization during acute inflammation-
dc.typeJournal Contribution-
dc.identifier.volume359-
local.format.pages13-
local.bibliographicCitation.jcatA1-
dc.description.notesUleman, JF (corresponding author), Univ Copenhagen, Dept Publ Hlth, Sect Epidemiol, Oster Farimagsgade 5, DK-1353 Copenhagen K, Denmark.-
dc.description.notesjeroen.uleman@sund.ku.dk-
local.publisher.placeSTE 800, 230 PARK AVE, NEW YORK, NY 10169 USA-
local.type.refereedRefereed-
local.type.specifiedArticle-
local.bibliographicCitation.artnr108997-
dc.identifier.doi10.1016/j.mbs.2023.108997-
dc.identifier.pmid36996999-
dc.identifier.isi000990411800001-
dc.contributor.orcidUleman, Jeroen/0000-0001-5050-8505; Mancini,-
dc.contributor.orcidEmiliano/0000-0002-5613-234X-
local.provider.typewosris-
local.description.affiliation[Uleman, Jeroen F.] Radboud Univ Nijmegen Med Ctr, Donders Inst Med Neurosci, Radboudumc Alzheimer Ctr, Dept Geriatr Med, Geert Grooteplein Zuid 10, NL-6500 HB Nijmegen, Netherlands.-
local.description.affiliation[Uleman, Jeroen F.; Mancini, Emiliano; te Velde, Anje A.; Castiglione, Filippo] Inst Adv Study, Amsterdam, Netherlands.-
local.description.affiliation[Uleman, Jeroen F.] Univ Copenhagen, Dept Publ Hlth, Sect Epidemiol, Copenhagen, Denmark.-
local.description.affiliation[Mancini, Emiliano] Hasselt Univ, Data Sci Inst, Hasselt, Belgium.-
local.description.affiliation[te Velde, Anje A.] Amsterdam UMC, Dept Global Hlth, Amsterdam, Netherlands.-
local.description.affiliation[Al-Shama, Rushd F. M.] Univ Amsterdam, Amsterdam UMC, Heart Ctr, Amsterdam Cardiovasc Sci,Dept Clin & Expt Cardiol, Amsterdam, Netherlands.-
local.description.affiliation[te Velde, Anje A.] Univ Amsterdam, Amsterdam UMC, AGEM, Tytgat Inst Liver & Intestinal Res, Amsterdam, Netherlands.-
local.description.affiliation[Kraneveld, Aletta D.] Univ Utrecht, Utrecht Inst Pharmaceut Sci, Div Pharmacol, Fac Sci, Amsterdam, Netherlands.-
local.description.affiliation[Castiglione, Filippo] Natl Res Council Italy, Inst Appl Comp, Rome, Italy.-
local.description.affiliation[Castiglione, Filippo] Technol Innovat Inst, Biotech Res Ctr, Masdar City, Abu Dhabi, U Arab Emirates.-
local.description.affiliation[Uleman, Jeroen F.] Univ Copenhagen, Dept Publ Hlth, Sect Epidemiol, Oster Farimagsgade 5, DK-1353 Copenhagen K, Denmark.-
local.uhasselt.internationalyes-
item.fulltextWith Fulltext-
item.contributorUleman, Jeroen F.-
item.contributorMANCINI, Emiliano-
item.contributorAl-Shama, Rushd F. M.-
item.contributorte Velde, Anje A.-
item.contributorKraneveld, Aletta D.-
item.contributorCastiglione, Filippo-
item.accessRightsOpen Access-
item.fullcitationUleman, Jeroen F.; MANCINI, Emiliano; Al-Shama, Rushd F. M.; te Velde, Anje A.; Kraneveld, Aletta D. & Castiglione, Filippo (2023) A multiscale hybrid model for exploring the effect of Resolvin D1 on macrophage polarization during acute inflammation. In: MATHEMATICAL BIOSCIENCES, 359 (Art N° 108997).-
crisitem.journal.issn0025-5564-
crisitem.journal.eissn1879-3134-
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