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Title: | BioMOBS: A multi-omics visual analytics workflow for biomolecular insight generation | Authors: | HEYLEN, Dries PEETERS, Jannes AERTS, Jan Ertaylan, Gokhan HOOYBERGHS, Jef |
Issue Date: | 2023 | Publisher: | PUBLIC LIBRARY SCIENCE | Source: | PLoS One, 18 (12) (Art N° e0295361) | Abstract: | One of the challenges in multi-omics data analysis for precision medicine is the efficient exploration of undiscovered molecular interactions in disease processes. We present BioMOBS, a workflow consisting of two data visualization tools integrated with an open-source molecular information database to perform clinically relevant analyses (https://github.com/driesheylen123/BioMOBS). We performed exploratory pathway analysis with BioMOBS and demonstrate its ability to generate relevant molecular hypotheses, by reproducing recent findings in type 2 diabetes UK biobank data. The central visualisation tool, where data-driven and literature-based findings can be integrated, is available within the github link as well. BioMOBS is a workflow that leverages information from multiple data-driven interactive analyses and visually integrates it with established pathway knowledge. The demonstrated use cases place trust in the usage of BioMOBS as a procedure to offer clinically relevant insights in disease pathway analyses on various types of omics data. | Notes: | Heylen, D (corresponding author), Hasselt Univ, Data Sci Inst DSI, Theory Lab, Diepenbeek, Belgium.; Heylen, D (corresponding author), Flemish Inst Technol Res VITO, Mol, Belgium. dries.heylen@vito.be |
Keywords: | Humans;Multiomics;Workflow;Software;Diabetes Mellitus, Type 2 | Document URI: | http://hdl.handle.net/1942/42572 | ISSN: | 1932-6203 | e-ISSN: | 1932-6203 | DOI: | 10.1371/journal.pone.0295361 | ISI #: | 001158744900061 | Datasets of the publication: | https://doi.org/10.1371/journal.pone.0295361.g001 | Rights: | 2023 Heylen et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. | Category: | A1 | Type: | Journal Contribution |
Appears in Collections: | Research publications |
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BioMOBS_ A multi-omics visual analytics workflow for biomolecular insight generation.pdf | Published version | 1.32 MB | Adobe PDF | View/Open |
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