Please use this identifier to cite or link to this item: http://hdl.handle.net/1942/43719
Title: Characterising information gains and losses when collecting multiple epidemic model outputs
Authors: Sherratt, Katharine
Srivastava, Ajitesh
Ainslie, Kylie
Singh, David E.
Cublier, Aymar
Marinescu, Maria Cristina
Carretero, Jesus
Garcia, Alberto Cascajo
FRANCO, Nicolas 
WILLEM, Lander 
ABRAMS, Steven 
FAES, Christel 
Beutels, Philippe
HENS, Niel 
Mueller, Sebastian
Charlton, Billy
Ewert, Ricardo
Paltra, Sydney
Rakow, Christian
Rehmann, Jakob
Conrad, Tim
Schutte, Christof
Nagel, Kai
Abbott, Sam
Grah, Rok
Niehus, Rene
Prasse, Bastian
Sandmann, Frank
Funk, Sebastian
Issue Date: 2024
Publisher: ELSEVIER
Source: Epidemics (Print), 47 (Art N° 100765)
Abstract: Background: Collaborative comparisons and combinations of epidemic models are used as policy-relevant evidence during epidemic outbreaks. In the process of collecting multiple model projections, such collaborations may gain or lose relevant information. Typically, modellers contribute a probabilistic summary at each time-step. We compared this to directly collecting simulated trajectories. We aimed to explore information on key epidemic quantities; ensemble uncertainty; and performance against data, investigating potential to continuously gain information from a single cross-sectional collection of model results. Methods: We compared projections from the European COVID-19 Scenario Modelling Hub. Five teams modelled incidence in Belgium, the Netherlands, and Spain. We compared July 2022 projections by incidence, peaks, and cumulative totals. We created a probabilistic ensemble drawn from all trajectories, and compared to ensembles from a median across each model's quantiles, or a linear opinion pool. We measured the predictive accuracy of individual trajectories against observations, using this in a weighted ensemble. We repeated this sequentially against increasing weeks of observed data. We evaluated these ensembles to reflect performance with varying observed data. Results: By collecting modelled trajectories, we showed policy-relevant epidemic characteristics. Trajectories contained a right-skewed distribution well represented by an ensemble of trajectories or a linear opinion pool, but not models' quantile intervals. Ensembles weighted by performance typically retained the range of plausible incidence over time, and in some cases narrowed this by excluding some epidemic shapes. Conclusions: We observed several information gains from collecting modelled trajectories rather than quantile distributions, including potential for continuously updated information from a single model collection. The value of information gains and losses may vary with each collaborative effort's aims, depending on the needs of projection users. Understanding the differing information potential of methods to collect model projections can support the accuracy, sustainability, and communication of collaborative infectious disease modelling efforts.
Notes: Sherratt, K (corresponding author), London Sch Hyg & Trop Med, London, England.
katharine.sherratt@lshtm.ac.uk
Keywords: Information;Scenarios;Uncertainty;Aggregation;Modelling
Document URI: http://hdl.handle.net/1942/43719
ISSN: 1755-4365
e-ISSN: 1878-0067
DOI: 10.1016/j.epidem.2024.100765
ISI #: WOS:001287307800001
Datasets of the publication: 10.5281/zenodo.10891377
Rights: 2024 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/)
Category: A1
Type: Journal Contribution
Appears in Collections:Research publications

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