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| | Issue Date | Title | Contributor(s) | Type | Cat. |
| 1 | 2024 | Unveiling the Molecular Mechanism of Trastuzumab Resistance in SKBR3 and BT474 Cell Lines for HER2 Positive Breast Cancer | Kokot, Anna; Gadakh, Sachin; Saha, Indrajit; Gajda, Ewa; Lazniewski, Michal; Rakshit, Somnath; Sengupta, Kaustav; Mollah, Ayatullah Faruk; Denkiewicz, Michal; GORCZAK, Katarzyna; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; Plewczynski, Dariusz | Journal Contribution | A1 |
| 2 | 2024 | Survival analysis: Methods for analyzing data with censored observations | BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 3 | 2024 | The Boosting | BECKER, Thijs; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 4 | 2024 | Deep learning | ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A2 |
| 5 | 2023 | Over-accrual in Bayesian adaptive trials with continuous futility stopping | GARCIA BARRADO, Leandro; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 6 | 2023 | Operational characteristics of univariate generalized pairwise comparisons with missing data | DELTUVAITE-THOMAS, Vaiva; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 7 | 2023 | Trial Design for Cancer Immunotherapy: A Methodological Toolkit | Saad, Everardo D.; Coart, Elisabeth; DELTUVAITE-THOMAS, Vaiva; GARCIA BARRADO, Leandro; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 8 | 2023 | Availability of Third Molars as Donor Teeth for Autotransplantation to Replace Congenitally Absent Second Premolars in Children and Young Adults | Bilinska, Malgorzata; BURZYKOWSKI, Tomasz; Plakwicz, Pawel; Zadurska, Malgorzata; Czochrowska, Ewa Monika | Journal Contribution | A1 |
| 9 | 2023 | Generalized linear models | BURZYKOWSKI, Tomasz; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, Dirk | Journal Contribution | A2 |
| 10 | 2023 | Validation of machine learning algorithms | BURZYKOWSKI, Tomasz; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, Dirk | Journal Contribution | A2 |
| 11 | 2023 | Introduction to machine learning | BURZYKOWSKI, Tomasz; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; VALKENBORG, Dirk | Journal Contribution | A2 |
| 12 | 2023 | Support vector machines | VALKENBORG, Dirk; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 13 | 2023 | Decision trees and random forests | BECKER, Thijs; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A1 |
| 14 | 2023 | Minimization in randomized clinical trials | Coart, Elisabeth; Bamps, Perrine; Quinaux, Emmanuel; Sturbois, Geneviève; Saad, Everardo D; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 15 | 2023 | Generalized pairwise comparisons for censored data: An overview | DELTUVAITE-THOMAS, Vaiva; VERBEECK, Johan; BURZYKOWSKI, Tomasz; BUYSE, Marc; Tournigand, Christophe; MOLENBERGHS, Geert; THAS, Olivier | Journal Contribution | A1 |
| 16 | 2023 | High-dimensional data | GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 17 | 2023 | Supervised learning | VALKENBORG, Dirk; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 18 | 2023 | Unsupervised learning | VALKENBORG, Dirk; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 19 | 2023 | Machine learning approach for the prediction of the number of sulphur atoms in peptides using the theoretical aggregated isotope distribution | AGTEN, Annelies; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A1 |
| 20 | 2022 | Relationship Among the Foraminal Area and Demographic and Clinical Characteristics of Patients with Low Back Pain | Lorenc , Tomasz; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 21 | 2022 | Clinical Trial Endpoints in Metastatic Cancer: Using Individual Participant Data to Inform Future Trials Methodology | Goldberg, Richard M.; Adams, Richard; BUYSE, Marc; Eng, Cathy; Grothey, Axel; Andre, Thierry; Sobrero, Alberto F.; Lichtman, Stuart M.; Benson, Al B.; Punt, Cornelis J. A.; Maughan, Tim; BURZYKOWSKI, Tomasz; Sommeijer, Dirkje; Saad, Everardo D.; Shi, Qian; Coart, Elisabeth; Chibaudel, Benoist; Koopman, Miriam; Schmoll, Hans-Joachim; Yoshino, Takayuki; Taieb, Julien; Tebbutt, Niall C.; Zalcberg, John; Tabernero, Josep; Van Cutsem , Eric; Matheson, Alastair; de Gramont, Aimery | Journal Contribution | A1 |
| 22 | 2022 | Surrogacy Beyond Prognosis: The Importance of “Trial-Level” Surrogacy | BUYSE, Marc; Saad, Everardo D.; BURZYKOWSKI, Tomasz; Regan, Meredith M.; Sweeney, Christopher S. | Journal Contribution | A1 |
| 23 | 2022 | The case against censoring of progression-free survival in cancer clinical trials - A pandemic shutdown as an illustration | Jamoul, Corinne; Collette, Laurence; Coart, Elisabeth; D'Hollander, Koenraad; BURZYKOWSKI, Tomasz; Saad, Everardo D; BUYSE, Marc | Journal Contribution | A1 |
| 24 | 2022 | Operational characteristics of generalized pairwise comparisons for hierarchically ordered endpoints | DELTUVAITE-THOMAS, Vaiva; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 25 | 2022 | Using an interim analysis based exclusively on an early outcome in a randomized clinical trial with a long-term clinical endpoint | Barrado, Leandro Garcia; BURZYKOWSKI, Tomasz; LEGRAND, Catherine; BUYSE, Marc | Journal Contribution | A1 |
| 26 | 2022 | Semi-parametric accelerated failure-time model: A useful alternative to the proportional-hazards model in cancer clinical trials | BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 27 | 2021 | Status of the alveolar bone after autotransplantation of developing premolars to the anterior maxilla assessed by CBCT measurements | Plakwicz, Pawel; Andreasen, Jens Ove; Gorska, Renata; BURZYKOWSKI, Tomasz; Czochrowska, Ewa | Journal Contribution | A1 |
| 28 | 2021 | Explanatory Model Analysis. Explore, Explain, and Examine Predictive Models | Biecek, Przemyslaw; BURZYKOWSKI, Tomasz | Book | B1 |
| 29 | 2021 | Evaluation of surrogate endpoints | MOLENBERGHS, Geert; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; BUYSE, Marc; ALONSO ABAD, Ariel; VAN DER ELST, Wim | Book Section | B2 |
| 30 | 2021 | Predicting the number of sulfur atoms in peptides and small proteins based on the observed aggregated isotope distribution | CLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 31 | 2020 | Progression-free survival (PFS) as a surrogate endpoint for overall survival (OS) in advanced/recurrent gastric cancer (AGC) treatment: Individual-patient-data (IPD) based meta-analysis of randomized trials | Oba, Koji; Paoletto, Xavier; Bang, Yung-Jue; Bouche, Olivier; Ducreux, Michel; Michiels, Stefan; Moehler, MarkusH; Morita, Satoshi; Ohashi, Yasuo; Sakamoto, Junichi; Sasako, Mitsuru; Shitara, Kohei; Van Cutsem, Eric; BUYSE, Marc; BURZYKOWSKI, Tomasz | Journal Contribution | M |
| 32 | 2020 | Bayesian biomarker-driven outcome-adaptive randomization with an imperfect biomarker assay | GARCIA BARRADO, Leandro; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 33 | 2020 | Meta-analytic approach to evaluation of surrogate endpoints | BURZYKOWSKI, Tomasz; BUYSE, Marc; MOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; SHKEDY, Ziv | Book Section | B2 |
| 34 | 2020 | The (generalized) hydrogen rule for organic molecules | CLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 35 | 2020 | A “Refined Hydrogen Rule” and a “Refined Hydrogen and Halogen Rule” for Organic Molecules | CLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 36 | 2020 | Unbiasedness and efficiency of non-parametric and UMVUE estimators of the probabilistic index and related statistics | VERBEECK, Johan; DELTUVAITE-THOMAS, Vaiva; BERCKMOES, Ben; BURZYKOWSKI, Tomasz; AERTS, Marc; THAS, Olivier; BUYSE, Marc; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 37 | 2020 | Visualizing the agreement of peptide assignments between different search engines | AGTEN, Annelies; VAN HOUTVEN, Joris; Askenazi, M; BURZYKOWSKI, Tomasz; Laukens, K; VALKENBORG, Dirk | Journal Contribution | A1 |
| 38 | 2019 | Disease-free survival as a surrogate for overall survival in patients with HER2-positive, early breast cancer in trials of adjuvant trastuzumab for up to 1 year: a systematic review and meta-analysis | Saad, Everardo D.; Squifflet, Pierre; BURZYKOWSKI, Tomasz; Quinaux, Emmanuel; Delaloge, Suzette; Mavroudis, Dimitris; Perez, Edith; Piccart-Gebhart, Martine; Schneider, Bryan P.; Slamon, Dennis; Wolmark, Norman; BUYSE, Marc | Journal Contribution | A1 |
| 39 | 2019 | The impact of the method of extracting metabolic signal from H-1-NMR data on the classification of samples: A case study of binning and BATMAN in lung cancer | PADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; LOUIS, Evelyne; ADRIAENSENS, Peter; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 40 | 2019 | Detection of atypical data in multicenter clinical trials using unsupervised statistical monitoring | Trotta, Laura; Kabeya, Yuusuke; BUYSE, Marc; Doffagne, Erik; Venet, David; Desmet, Lieven; BURZYKOWSKI, Tomasz; Tsuburaya, Akira; Yoshida, Kazuhiro; Miyashita, Yumi; Morita, Satoshi; Sakamoto, Junichi; Praveen, Paurush; Oba, Koji | Journal Contribution | A1 |
| 41 | 2019 | A Poisson approach to the validation of failure time surrogate endpoints in individual patient data meta-analyses | Rotolo, Federico; PAOLETTI, Xavier; BURZYKOWSKI, Tomasz; BUYSE, Marc; Michiels, Stefan | Journal Contribution | A1 |
| 42 | 2019 | Joint modelling of a binary and a continuous outcome measured at two cycles to determine the optimal dose | Ezzalfani, Monia; BURZYKOWSKI, Tomasz; PAOLETTI, Xavier | Journal Contribution | A1 |
| 43 | 2019 | Evaluation of Continuous Tumor-Size-Based End Points as Surrogates for Overall Survival in Randomized Clinical Trials in Metastatic Colorectal Cancer | BURZYKOWSKI, Tomasz; Coart, E.; Saad, E.D.; Shi, Q.; Sommeijer, D.W.; Bokemeyer, C.; Díaz-Rubio, E.; Douillard, Jean-Yves; Falcone, A.; Fuchs, C.; Goldberg, R.M.; Hecht, R.; Hoff, P.M.; Hurwitz, H.; Kabbinavar, F.F.; Koopman, M.; Maughan, T.; Punt, C.J.A.; Saltz, L.; Schmoll, Hans-Joachim; Seymour, M.T.; Tebbutt, N.C.; Tournigand, C.; Van Cutsem, E.; de Gramont, A.; Zalcberg, J.R.; BUYSE, Marc | Journal Contribution | A1 |
| 44 | 2019 | The retrospective study of 93 patients with transmigration of mandibular canine and a comparative analysis with a control group | Plakwicz, Pawel; Abramczyk, Joanna; Wojtaszek-Lis, Julita; Sajkowska, Jolanta; Warych, Barbara; Gawron, Katarzyna; BURZYKOWSKI, Tomasz; Zadurska, Malgorzata; Czochrowska, Ewa Monika; Wojtowicz, Andrzej; Gorska, Renata; Kukula, Krzysztof | Journal Contribution | A1 |
| 45 | 2019 | Chronological Trends in Progression-Free, Overall, and Post-Progression Survival in First-Line Therapy for Advanced NSCLC | Rutkowski, Jacek; Saad, Everardo D.; BURZYKOWSKI, Tomasz; BUYSE, Marc; Jassem, Jacek | Journal Contribution | A1 |
| 46 | 2019 | A multivariate linear model for investigating the association between gene-module co-expression and a continuous covariate | PADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; Salo, Perttu; Perola, Markus; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 47 | 2019 | A Bayesian Framework Allowing Incorporation of Retrospective Information in Prospective Diagnostic Biomarker-Validation Designs | GARCIA BARRADO, Leandro; Coart, Els; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 48 | 2019 | A Multivariate Negative-Binomial Model with Random Effects for Differential Gene-Expression Analysis of Correlated mRNA Sequencing Data | Kazakiewicz, D; CLAESEN, Jurgen; GORCZAK, Katarzyna; Plewczynski, D; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 49 | 2019 | A Conceptual Framework for Abundance Estimation of Genomic Targets in the Presence of Ambiguous Short Sequencing Reads | GORCZAK, Katarzyna; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 50 | 2019 | De novo prediction of the elemental composition of peptides and proteins based on a single mass | CLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 51 | 2019 | Experimental design in quantitative proteomics | BURZYKOWSKI, Tomasz; CLAESEN, Jurgen; VALKENBORG, Dirk | Book Section | B2 |
| 52 | 2018 | The search for surrogate endpoints for immunotherapy trials | BUYSE, Marc; BURZYKOWSKI, Tomasz; Saad, Everardo D. | Journal Contribution | A2 |
| 53 | 2018 | Comprehensive analysis of cancer stemness | Malta, Tathiane M.; Sokolov, Artem; Gentles, Andrew J.; BURZYKOWSKI, Tomasz; Poisson, Laila; Weinstein, John; Kaminska, Bozena; Huelsken, Joerg; Omberg, Larsson; Gevaert, Olivier; Colaprico, Antonio; Czerwinska, Patrycja; Mazurek, Sylwia; Mishra, Lopa; Heyn, Holger; Krasnitz, Alex; Godwin, Andrew K.; Lazar, Alexander J.; Stuart, Joshua M.; Hoadley, Katherine; Laird, Peter W.; Noushmehr, Houtan; Wiznerowicz, Maciej | Journal Contribution | M |
| 54 | 2018 | Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation | Malta, Tathiane M.; Sokolov, Artem; Gentles, Andrew J.; BURZYKOWSKI, Tomasz; Poisson, Laila; Weinstein, John N.; Kaminska, Bozena; Huelsken, Joerg; Omberg, Larsson; Gevaert, Olivier; Colaprico, Antonio; Czerwinska, Patrycja; Mazurek, Sylwia; Mishra, Lopa; Heyn, Holger; Krasnitz, Alex; Godwin, Andrew K.; Lazar, Alexander J.; Stuart, Joshua M.; Hoadley, Katherine A.; Laird, Peter W.; Noushmehr, Houtan; Wiznerowicz, Maciej | Journal Contribution | A1 |
| 55 | 2018 | Sequential double cross-validation for assessment of added predictive ability in high-dimensional omic applications | Rodriguez-Girondo, Mar; Salo, Perttu; BURZYKOWSKI, Tomasz; Perola, Markus; HOUWING-DUISTERMAAT, Jeanne; Mertens, Bart | Journal Contribution | A1 |
| 56 | 2018 | Understanding and Communicating Measures of Treatment Effect on Survival: Can We Do Better? | Saad, Everardo D.; Zalcberg, John R.; Peron, Julien; Coart, Elisabeth; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 57 | 2018 | Re-induction using whole cell melanoma vaccine genetically modified to melanoma stem cells-like beyond recurrence extends long term survival of high risk resected patients - updated results | Mackiewicz, Jacek; BURZYKOWSKI, Tomasz; Izycki, Dariusz; Mackiewicz, Andrzej | Journal Contribution | A1 |
| 58 | 2018 | Statistical evaluation of surrogate endpoints in cancer clinical trials | BUYSE, Marc; MOLENBERGHS, Geert; PAOLETTI, Xavier; Oba, K.; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, Tomasz | Book Section | B2 |
| 59 | 2017 | Applied Surrogate Endpoint Evaluation Methods with SAS and R | ALONSO ABAD, Ariel; BIGIRUMURAME, Theophile; BURZYKOWSKI, Tomasz; BUYSE, Marc; MOLENBERGHS, Geert; MUCHENE, Leacky; PERUALILA, Nolen Joy; SHKEDY, Ziv; VAN DER ELST, Wim | Book | B1 |
| 60 | 2017 | Evaluation of failure time surrogate endpoints in individual patient data meta-analyses of randomized clinical trials. A poisson approach | Rotolo, Federico; PAOLETTI, Xavier; BURZYKOWSKI, Tomasz; BUYSE, Marc; Michiels, Stefan | Journal Contribution | M |
| 61 | 2017 | Adoption of Pathologic Complete Response as a Surrogate End Point in Neoadjuvant Trials in HER2-Positive Breast Cancer Still an Open Question | BURZYKOWSKI, Tomasz; Saad, Everardo D.; BUYSE, Marc | Journal Contribution | A1 |
| 62 | 2017 | Precision medicine needs randomized clinical trials | Saad, Everardo D.; PAOLETTI, Xavier; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 63 | 2017 | Use of the Beta-Binomial Model for Central Statistical Monitoring of Multicenter Clinical Trials | Desmet, Lieven; Venet, David; Doffagne, Erik; Timmermans, Catherine; LEGRAND, Catherine; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 64 | 2017 | Estimation of diagnostic accuracy of a combination of continuous biomarkers allowing for conditional dependence between the biomarkers and the imperfect reference-test | GARCIA BARRADO, Leandro; Coart, Els; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 65 | 2017 | An open label phase II study evaluating first-line EGFR tyrosine kinase inhibitor erlotinib in non-small cell lung cancer patients with tumors showing high EGFR gene copy number | Szutowicz-Zielinska, Ewa; Konopa, Krzysztof; Kowalczyk, Anna; Suszko-Kazarnowicz, Malgorzata; Duchnowska, Renata; Szczesna, Aleksandra; Ratajska, Magdalena; Sowa, Aleksander; Limon, Janusz; Biernat, Wojciech; BURZYKOWSKI, Tomasz; Jassem, Jacek; Dziadziuszko, Rafal | Journal Contribution | A1 |
| 66 | 2017 | The Analysis of Peptide-Centric Mass-Spectrometry Data Utilizing Information About the Expected Isotope Distribution | BURZYKOWSKI, Tomasz; CLAESEN, Jurgen; VALKENBORG, Dirk | Book Section | B2 |
| 67 | 2016 | Statistical monitoring of data quality and consistency in the Stomach Cancer Adjuvant Multi-institutional Trial Group Trial | Timmermans, Catherine; Doffagne, Erik; Venet, David; Desmet, Lieven; LEGRAND, Catherine; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 68 | 2016 | Statistical evaluation of surrogate endpoints with examples from cancer clinical trials | BUYSE, Marc; MOLENBERGHS, Geert; PAOLETTI, Xavier; Oba, Koji; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 69 | 2016 | Neoadjuvant as Future for Drug Development in Breast Cancer-Letter | BUYSE, Marc; BURZYKOWSKI, Tomasz; Saad, Everardo D. | Journal Contribution | A1 |
| 70 | 2016 | Development of a diagnostic test based on multiple continuous biomarkers with an imperfect reference test | GARCIA BARRADO, Leandro; Coart, Els; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 71 | 2016 | Normalisation of brain spectroscopy findings in Niemann-Pick disease type C patients treated with miglustat | Sedel, Frédéric; Chabrol, Brigitte; Audoin, Bertrand; Kaphan, Elsa; Tranchant, Christine; BURZYKOWSKI, Tomasz; Tourbah, Ayman; Vanier, Marie T.; Galanaud, Damien | Journal Contribution | A1 |
| 72 | 2016 | COMPUTATIONAL METHODS AND CHALLENGES IN HYDROGEN/DEUTERIUM EXCHANGE MASS SPECTROMETRY | CLAESEN, Jurgen; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 73 | 2016 | The Detection of Metabolite-Mediated Gene Module Co-Expression Using Multivariate Linear Models | PADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; Perola, Markus; Salo, Perttu; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 74 | 2016 | Adaptive Randomization of Neratinib in Early Breast Cancer | BUYSE, Marc; Saad, E.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 75 | 2016 | An Information-Theoretic Approach for the Evaluation of Surrogate Endpoints Based on Causal Inference | ALONSO ABAD, Ariel; VAN DER ELST, Wim; MOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 76 | 2016 | Data-driven risk identification in phase III clinical trials using central statistical monitoring | Timmermans, Catherine; Venet, David; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 77 | 2015 | Event-Free Survival Is a Surrogate for Overall Survival in Patients Treated for Acute Myeloid Leukemia | Schlenk, Richard F.; Doehner, Hartmut; Doehner, Konstanze; Ganser, Arnold; Heuser, Michael; Benner, Axel; BUYSE, Marc; BURZYKOWSKI, Tomasz | Journal Contribution | M |
| 78 | 2015 | Surrogate properties of survival endpoints in metastatic soft-tissue sarcoma: A meta-analysis. | Savina, Marion; LITIERE, Saskia; Penel, Nicolas; Rondeau, Virginie; BURZYKOWSKI, Tomasz; Toulmonde, Maud; Italiano, Antoine; Mathoulin-Pelissier, Simone; Bellera, Carine A. | Journal Contribution | M |
| 79 | 2015 | Correcting for the Absence of a Gold Standard Improves Diagnostic Accuracy of Biomarkers in Alzheimer's Disease | Coart, Els; GARCIA BARRADO, Leandro; Duits, Flora H.; Scheltens, Philip; van der Flier, Wiesje M.; Teunissen, Charlotte E.; van der Vies, Saskia M.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 80 | 2015 | A hidden Markov-model for gene mapping based on whole-genome next generation sequencing data | CLAESEN, Jurgen; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 81 | 2015 | A Nonhomogeneous Hidden Markov Model for Gene Mapping Based on Next-Generation Sequencing Data | ZAMANZAD GHAVIDEL, Fatemeh; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 82 | 2015 | Whole Cell Therapeutic Vaccine Modified With Hyper-IL6 for Combinational Treatment of Nonresected Advanced Melanoma | Jacek, Mackiewicz; Aldona, Karczewska-Dzionk; Maria, Laciak; Malgorzata, Kapcinska; Maciej, Wiznerowicz; BURZYKOWSKI, Tomasz; Zakowska, Monika; Stefan, Rose-John; Andrzej, Mackiewicz | Journal Contribution | A1 |
| 83 | 2015 | PTEN Loss Is Associated with Worse Outcome in HER2-Amplified Breast Cancer Patients but Is Not Associated with Trastuzumab Resistance | Stern, Howard M.; Gardner, Humphrey; BURZYKOWSKI, Tomasz; Elatre, Wafaa; O'Brien, Carol; Lackner, Mark R.; Pestano, Gary A.; Santiago, Angela; Villalobos, Ivonne; Eiermann, Wolfgang; Pienkowski, Tadeusz; Martin, Miguel; Robert, Nicholas; Crown, John; Nuciforo, Paolo; Bee, Valerie; Mackey, John; Slamon, Dennis J.; Press, Michael F. | Journal Contribution | A1 |
| 84 | 2015 | Transferring Cut-off Values between Assays for Cerebrospinal Fluid Alzheimer's Disease Biomarkers | GARCIA BARRADO, Leandro; Coart, Els; Vanderstichele, Hugo M. J.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 85 | 2015 | Differences in the Elemental Isotope Definition May Lead to Errors in Modern Mass-Spectrometry-Based Proteomics | CLAESEN, Jurgen; Lermyte, Frederik; Sobott, Frank; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A1 |
| 86 | 2015 | On the relationship between the causal-inference and meta-analytic paradigms for the validation of surrogate endpoints | ALONSO ABAD, Ariel; VAN DER ELST, Wim; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 87 | 2015 | Biomarker‑based surrogate endpoints | BUYSE, Marc; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; ALONSO ABAD, Ariel | Book Section | B2 |
| 88 | 2014 | Implementation Issues in Adaptive Design Trials | Danielson, Linda; Carlier, Jerome; BURZYKOWSKI, Tomasz; BUYSE, Marc | Book Section | B2 |
| 89 | 2014 | Linear mixed-effects models for central statistical monitoring of multicenter clinical trials | Desmet, L.; Venet, D.; Doffagne, E.; Timmermans, C.; BURZYKOWSKI, Tomasz; LEGRAND, Catherine; BUYSE, Marc | Journal Contribution | A1 |
| 90 | 2014 | Comparison of the Mahalanobis Distance and Pearson's χ(2) Statistic as Measures of Similarity of Isotope Patterns. | ZAMANZAD GHAVIDEL, Fatemeh; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A1 |
| 91 | 2014 | CXCL5 as a potential novel prognostic factor in early stage non-small cell lung cancer: results of a study of expression levels of 23 genes | Kowalczuk, Oksana; BURZYKOWSKI, Tomasz; Niklinska, Wieslawa Ewa; Kozlowski, Miroslaw; Chyczewski, Lech; Niklinski, Jacek | Journal Contribution | A1 |
| 92 | 2014 | The use of the isotopic distribution as a complementary quality metric to assess tandem mass spectra results | ZAMANZAD GHAVIDEL, Fatemeh; Mertens, Inge; Baggerman, Geert; Laukens, Kris; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A1 |
| 93 | 2013 | Estimation of Optimally Combined-Biomarker Accuracy in the Absence of a Gold Standard Reference Test | GARCIA BARRADO, Leandro; COART, Elisabeth; BURZYKOWSKI, Tomasz | Proceedings Paper | C1 |
| 94 | 2013 | Linear Mixed Effects Models Using R. : A Step-by-Step Approach | Gałecki, Andrzej; BURZYKOWSKI, Tomasz | Book | B1 |
| 95 | 2013 | Evaluation of Progression Free Survival as a surrogate for Overall Survival for prostate cancer treatment: Software development | BIGIRUMURAME, Theophile; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; VAN SANDEN, Suzy; THILAKARATHNE, Pushpike; Dries, Joris | Conference Material | C2 |
| 96 | 2013 | Review: Clinical Trial Methodology: Surrogate endpoints: when should they be used? | MOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 97 | 2013 | Immunotargeting melanoma stem cells with Hyper-IL6 modified whole cell therapeutic vaccine (AGI-101H) in patients with advanced melanoma - a joint analysis of two phase 2 studies | Mackiewicz, Jacek; Wysocki, P.; Karczewska-Dzionka, A.; Kwiatkowska-Borowczyk, E.; Kozlowska, A.; BURZYKOWSKI, Tomasz; Rose-John, S.; Wiznerowicz, M.; Mackiewicz, Andrzej | Journal Contribution | M |
| 98 | 2013 | Statistical evaluation of surrogate endpoints in clinical studies | MOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, Tomasz; BUYSE, Marc | Book Section | B2 |
| 99 | 2013 | A Markov-chain-based regression model with random effects for the analysis of 18O-labelled mass spectra | ZHU, Qi; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 100 | 2013 | Evaluation of normalization methods to pave the way towards large-scale LC-MS-based metabolomic profiling experiments | EJIGU, Bedilu; VALKENBORG, Dirk; Baggerman, Geert; Vanaerschot, Manu; Witters, Erwin; Dujardin, Jean-Claude; BURZYKOWSKI, Tomasz; Berg, Maya | Journal Contribution | A1 |
| 101 | 2013 | Role of chemotherapy for advanced/recurrent gastric cancer: An individual-patient-data meta-analysis | Oba, Koji; PAOLETTI, Xavier; Bang, Yung-Jue; Bleiberg, Harry; BURZYKOWSKI, Tomasz; Fuse, Nozomu; Michiels, Stefan; Morita, Satoshi; Ohashi, Yasuo; Pignon, Jean-Pierre; Rougier, Philippe; Pompidou, Georges; Sakamoto, Junichi; Sargent, Daniel; Sasako, Mitsuru; Shitara, Kohei; Tsuburaya, Akira; Van Cutsem, Eric; BUYSE, Marc | Journal Contribution | A1 |
| 102 | 2013 | Markers for nutrition studies: review of criteria for the evaluation of markers | de Vries, Jan; Antoine, Jean-Michel; BURZYKOWSKI, Tomasz; Chiodini, Alessandro; Gibney, Mike; Kuhnle, Gunter; Meheust, Agnes; Pijls, Loek; Rowland, Ian | Journal Contribution | A1 |
| 103 | 2013 | Simultaneous Mapping of Multiple Gene Loci with Pooled Segregants | CLAESEN, Jurgen; CLEMENT, Lieven; SHKEDY, Ziv; Foulquié-Moreno, Maria R.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 104 | 2013 | Disease-Free Survival as a Surrogate for Overall Survival in Adjuvant Trials of Gastric Cancer: A Meta-Analysis | Oba, Koji; PAOLETTI, Xavier; Alberts, Steven; Bang, Yung-Jue; Benedetti, Jacqueline; Bleiberg, Harry; CATALANO, Paul; Lordick, Florian; Michiels, Stefan; Morita, Satoshi; Ohashi, Yasuo; Pignon, Jean-pierre; Rougier, Philippe; Sasako, Mitsuru; Sakamoto, Junichi; Sargent, Daniel; Shitara, Kohei; Cutsem, Eric Van; BUYSE, Marc; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 105 | 2013 | Progression-Free Survival as a Surrogate for Overall Survival in Advanced/Recurrent Gastric Cancer Trials: A Meta-Analysis | PAOLETTI, Xavier; Oba, Koji; Bang, Yung-Jue; Bleiberg, Harry; Boku, Narikazu; Bouche, Olivier; Fuse, Nozomu; Michiels, Stefan; Moehler, Markus; Morita, Satoshi; Ohashi, Yasuo; Ohtsu, Atsushi; Roth, Arnaud; Rougier, Philippe; Sakamoto, Junichi; Sargent, Daniel; Sasako, Mitsuru; Shitara, Kohei; Thuss-Patience, Peter; Van Cutsem, Eric; BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 106 | 2013 | BRAIN: A Universal Tool for High-Throughput Calculations of the Isotopic Distribution for Mass Spectrometry | Dittwald, Piotr; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk; Gambin, Anna | Journal Contribution | A1 |
| 107 | 2012 | Design and analysis of experiments: `omics’ does not mean ‘an exception’ | BURZYKOWSKI, Tomasz | Proceedings Paper | C1 |
| 108 | 2012 | Normalization of large-scale mass spectrometry-based metabolic profiling experiments | EJIGU, Bedilu; VALKENBORG, Dirk; Berg, Maya; Dujardin, Jean-Claude; BURZYKOWSKI, Tomasz | Conference Material | C2 |
| 109 | 2012 | Simultaneous Inferences for Ratio Parameters Using Multiple Contrasts Test | LIN, Dan; Djira, Gemechis D.; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Hothorn, Ludwig A. | Book Section | B2 |
| 110 | 2012 | Single Contrast Tests | Lin, Dan; SHKEDY, Ziv; Yekutieli, Daniel; BURZYKOWSKI, Tomasz; Göhlmann, Hinrich W.H.; De Bondt, An; Verbeke, Tobias; BIJNENS, Luc | Book Section | B2 |
| 111 | 2012 | Reply to the Comment on: "An efficient method to calculate the aggregated isotopic distribution and exact center-masses" | CLAESEN, Jurgen; Dittwald, Piotr; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | M |
| 112 | 2012 | The isotopic distribution conundrum | VALKENBORG, Dirk; Mertens, Inge; Lemiere, Filip; Witters, Erwin; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 113 | 2012 | A statistical approach to central monitoring of data quality in clinical trials | Venet, David; Doffagne, Erik; BURZYKOWSKI, Tomasz; Beckers, Francois; Tellier, Yves; Genevois-Marlin, Eric; Becker, Ursula; Bee, Valerie; Wilson, Veronique; LEGRAND, Catherine; BUYSE, Marc | Journal Contribution | A1 |
| 114 | 2012 | Predicting Treatment Effect from Surrogate Endpoints and Historical Trials: An Extrapolation Involving Probabilities of a Binary Outcome or Survival to a Specific Time | Baker, Stuart G.; Sargent, Daniel J.; BUYSE, Marc; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 115 | 2012 | Long-term survival of high-risk melanoma patients immunized with a Hyper-IL-6-modified allogeneic whole-cell vaccine after complete resection | Mackiewicz, Andrzej; Mackiewicz, Jacek; Wysocki, Piotr J.; Wiznerowicz, Maciej; Kapcinska, Malgorzata; Laciak, Maria; Rose-John, Stefan; Izycki, Dariusz; BURZYKOWSKI, Tomasz; Karczewska-Dzionk, Aldona | Journal Contribution | A1 |
| 116 | 2012 | An Efficient Method to Calculate the Aggregated Isotopic Distribution and Exact Center-Masses | CLAESEN, Jurgen; Dittwald, Piotr; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Journal Contribution | A1 |
| 117 | 2012 | GENOMIC BIOMARKERS FOR A BINARY CLINICAL OUTCOME IN EARLY DRUG DEVELOPMENT MICROARRAY EXPERIMENTS | VAN SANDEN, Suzy; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Gohlmann, Hinrich W. H.; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 118 | 2011 | THE PERFORMANCE OF DISCRIMINANT ANALYSIS FOR DIFFERENTIATING BETWEEN GENOTOXIC AND NONGENOTOXIC CARCINOGENS | Ćwiklinska-Jurkowska, Małgorzata; BURZYKOWSKI, Tomasz; Wietlicka-Piszcz, Magdalena | Journal Contribution | A2 |
| 119 | 2011 | A Bayesian model-averaging approach to the quantification of overlapping peptides in an MALDI-TOF mass spectrum. | ZHU, Qi; KASIM, Adetayo; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 120 | 2011 | OUTCOME OF TRIPLE PELVIC OSTEOTOMY IN DOGS IS ESTABLISHED WITHIN A MONTH AFTER THE SURGERY | Degorska, Beata; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 121 | 2011 | Individual patient data meta-analysis of randomized trials evaluating IL-2 monotherapy as remission maintenance therapy in acute myeloid leukemia | BUYSE, Marc; Squifflet, Pierre; Lange, Beverly J.; Alonzo, Todd A.; Larson, Richard A.; Kolitz, Jonathan E.; George, Stephen L.; Bloomfield, Clara D.; Castaigne, Sylvie; Chevret, Sylvie; Blaise, Didier; Maraninchi, Dominique; Lucchesi, Kathryn J.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 122 | 2011 | Evaluation of Laplace distribution-based ANOVA models applied to microarray data. | VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 123 | 2011 | Comparative assessment of trial-level surrogacy measures for candidate time-to-event surrogate endpoints in clinical trials | Shi, Qian; Renfro, Lindsay A.; Bot, Brian M.; BURZYKOWSKI, Tomasz; BUYSE, Marc; Sargent, Daniel J. | Journal Contribution | A1 |
| 124 | 2011 | A Bayesian Markov-Chain-Based Heteroscedastic Regression Model for the Analysis of O-18-Labeled Mass Spectra | ZHU, Qi; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 125 | 2011 | A Markov-Chain Model for the Analysis of High-Resolution Enzymatically O-18-Labeled Mass Spectra | VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 126 | 2010 | Outcome of per protocol best-evidence based routine breast cancer care in a large regional hospital in Belgium: the importance of a prospective database in quality assurance. | Van De Putte, G.; Vlasselaer, J.; TESHOME AYELE, Birhanu; GADDAH, Auguste; BURZYKOWSKI, Tomasz; Schobbens, J.C.; Benijts, G.; DE JONGE, Eric | Journal Contribution | A2 |
| 127 | 2010 | Simplified modeling strategies for surrogate validation with multivariate failure-time data | CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 128 | 2010 | A unified framework for the evaluation of surrogate endpoints in mental-health clinical trials | MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; ALONSO ABAD, Ariel; ASSAM NKOUIBERT, Pryseley; Tilahun, Abel; BUYSE, Marc | Journal Contribution | A1 |
| 129 | 2010 | Benefit of Adjuvant Chemotherapy for Resectable Gastric Cancer A Meta-analysis | PAOLETTI, Xavier; Oba, Koji; BURZYKOWSKI, Tomasz; Michiels, Stefan; Ohashi, Yasuo; Pignon, Jean-Pierre; Rougier, Philippe; Sakamoto, Junichi; Sargent, Daniel; Sasako, Mitsuru; Van Cutsem, Eric; BUYSE, Marc | Journal Contribution | A1 |
| 130 | 2010 | Missing data : discussion points from the PSI missing data expert group | BURZYKOWSKI, Tomasz; Carpenter, James; Coens, Corneel; Evans, Daniel; France, Lesley; Kenward, Mike; Lane, Peter; Matcham, James; Phillips, Alan; Roger, James; Sullivan, Brian; White, Ian; Yu, Ly-Mee; Morgan, David | Journal Contribution | A1 |
| 131 | 2010 | Markov-Chain-Based Heteroscedastic Regression Model for the Analysis of High-Resolution Enzymatically O-18-Labeled Mass Spectra | ZHU, Qi; VALKENBORG, Dirk; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 132 | 2010 | The correlation structure of longitudinal measurements of vision in patients with macular degeneration. | BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 133 | 2009 | Statistical power calculations for clustered continuous data | Galecki, A.T.; Chen, S.; Faulkner, J.A.; Ashton-Miller, J.; BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 134 | 2009 | The English Polish Dictionary of the Clinical Biostatistics Terminology | BURZYKOWSKI, Tomasz; Kawalec, E.; Kraszewska, E.; Kupsc, W. | Book | B1 |
| 135 | 2009 | Multiple contrast test for detecting monotonic dose-response relationship and FDR-adjusted confidence intervals for selected parameters in a microarray Setting | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Yekutieli, D.; De Bondt, A.; Göhlmann, WHH.; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 136 | 2009 | A Comparison of Procedures for Controlling the False Discovery Rate in the Presence of Small Variance Genes: A Simulation Study | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 137 | 2009 | Surrogate endpoints: wishful thinking or reality? (vol 17, pg 463-466, 2008) | BURZYKOWSKI, Tomasz | Journal Contribution | M |
| 138 | 2009 | A strategy for the prior processing of high-resolution mass spectral data obtained from high-dimensional combined fractional diagonal chromatography | VALKENBORG, Dirk; Thomas, Gregoire; Krols, Luc; Kas, Koen; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 139 | 2009 | Disease-free survival as a surrogate endpoint for overall survival in an adjuvant trial of curatively resected stomach cancer using individual patient data meta-analysis | BURZYKOWSKI, Tomasz; Bang, Y. | Journal Contribution | M |
| 140 | 2009 | Surrogate endpoints for overall survival in locally advanced head and neck cancer: meta-analyses of individual patient data | Michiels, Stefan; Le Maitre, Aurelie; BUYSE, Marc; BURZYKOWSKI, Tomasz; Maillard, Emilie; Bogaerts, Jan; Vermorken, Jan B.; Budach, Wilfried; Pajak, Thomas F.; Ang, Kian K.; Bourhis, Jean; Pignon, Jean-Pierre | Journal Contribution | A1 |
| 141 | 2008 | Processing of high-resolution MALDI-TOF mass spectometry data by using an average isotopic distribution | BURZYKOWSKI, Tomasz; VALKENBORG, Dirk | Proceedings Paper | C1 |
| 142 | 2008 | Fitting conditional survival models to meta-analytic data by using a transformation toward mixed-effects models | MASSONNET, Goele; JANSSEN, Paul; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 143 | 2008 | An Investigation on Performance of Significance Analysis of Microarray (SAM) for the Comparisons of Several Treatments with one Control in the Presence of Small-variance Genes | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Ion, R.; Goehlmann, H.W.H.; De Bondt, A.; Perera, T.; Geerts, T.; Van den Wyngaert, I.; BIJNENS, Luc | Proceedings Paper | C1 |
| 144 | 2008 | Performance of gene selection and classification methods in a microarray setting: A simulation study | VAN SANDEN, Suzy; LIN, Dan; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 145 | 2008 | Surrogate endpoints: wishful thinking or reality? | BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 146 | 2008 | Evaluation of tumor response, disease control, progression-free survival, and time to progression as potential surrogate end points in metastatic breast cancer | BURZYKOWSKI, Tomasz; BUYSE, Marc; Piccart-Gebhart, Martine J.; Sledge, George; Carmichael, James; Lueck, Hans-Joachim; Mackey, John R.; Nabholtz, Jean-Marc; Paridaens, Robert; Biganzoli, Laura; Jassem, Jacek; Bontenbal, Marijke; Bonneterre, Jacques; Chan, Stephen; Basaran, Gul Atalay; Therasse, Patrick | Journal Contribution | A1 |
| 147 | 2008 | The meta-analytic framework for the evaluation of surrogate endpoints in clinical trials | MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; ALONSO ABAD, Ariel; ASSAM NKOUIBERT, Pryseley; TILAHUN ESHETE, Abel; BUYSE, Marc | Journal Contribution | A1 |
| 148 | 2008 | Exploring and validating surrogate endpoints in colorectal cancer | BURZYKOWSKI, Tomasz; BUYSE, Marc; Yothers, Greg; Sakamoto, Junichi; Sargent, Dan | Journal Contribution | A1 |
| 149 | 2008 | Assessment of the usefulness of the fenestration method in cases of disc extrusion in the cervical and thoraco-lumbar spine in chondrodystrophic dogs | Sterna, J.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 150 | 2008 | A model-based method for the prediction of the isotopic distribution of peptides | VALKENBORG, Dirk; JANSEN, Ivy; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 151 | 2008 | Taxanes alone or in combination with anthracyclines as first-line therapy of patients with metastatic breast cancer | Piccart-Gebhart, Martine J.; BURZYKOWSKI, Tomasz; BUYSE, Marc; Sledge, George; Carmichael, James; Luck, Hans-Joachim; Mackey, John R.; Nabholtz, Jean-Marc; Paridaens, Robert; Biganzoli, Laura; Jassem, Jacek; Bontenbal, Marijke; Bonneterre, Jacques; Chan, Stephen; Basaran, Gul Atalay; Therasse, Patrick | Journal Contribution | A1 |
| 152 | 2008 | Individual- and trial-level surrogacy in colorectal cancer | BUYSE, Marc; BURZYKOWSKI, Tomasz; Michiels, Stefan; Carroll, Kevin | Journal Contribution | A1 |
| 153 | 2008 | A Cross-Validation Study to Select a Classification Procedure for Clinical Diagnosis Based on Proteomic Mass Spectrometry | VALKENBORG, Dirk; VAN SANDEN, Suzy; LIN, Dan; KASIM, Adetayo; JANSEN, Ivy; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; HALDERMANS, Philippe; ZHU, Qi | Journal Contribution | A1 |
| 154 | 2008 | Titrating Theileria parva: Single stocks against combination of stocks | Speybroeck, Niko; Marcotty, Tanguy; AERTS, Marc; Dolan, Tom; Williams, Brian; Lauer, Jeremy; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; Mulumba, Misheck; Berkvens, Dirk | Journal Contribution | A1 |
| 155 | 2008 | Information theory based marker evaluation | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; AERTS, Marc; Göhlmann, H.W.H.; De Bondt, A.; Perera, T.; Geerts, T.; Van den Wyngaert, I.; BIJNENS, Luc | Proceedings Paper | C2 |
| 156 | 2007 | Finding clusters of positive and negative coregulated genes in gene expression data | KOCH, Kerstin; Schonauer, Stefan; JANSEN, Ivy; VAN DEN BUSSCHE, Jan; BURZYKOWSKI, Tomasz | Proceedings Paper | C1 |
| 157 | 2007 | Comparison of different estimation procedures for proportional hazards model with random effects | CORTINAS ABRAHANTES, Jose; LEGRAND, Catherine; BURZYKOWSKI, Tomasz; JANSSEN, Paul; Ducrocq, Vincent; DUCHATEAU, Luc | Journal Contribution | A1 |
| 158 | 2007 | Using a Poisson approximation to predict the isotopic distribution of sulphur-containing peptides in a peptide-centric proteomic approach | VALKENBORG, Dirk; ASSAM NKOUIBERT, Pryseley; Thomas, Gregoire; Krols, Luc; Kas, Koen; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 159 | 2007 | Are prostate-specific antigen changes valid surrogates for survival in hormone-refractory prostate cancer? A meta-analysis is needed! | Collette, Laurence; BUYSE, Marc; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 160 | 2007 | Reintroduction of oxaliplatin is associated with improved survival in advanced colorectal cancer | de Gramont, Aimery; BUYSE, Marc; CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz; Quinaux, Emmanuel; Cervantes, Andres; Figer, Arie; Lledo, Gerard; Flesch, Michel; Mineur, Laurent; Carola, Elisabeth; Etienne, Pierre-Luc; Rivera, Fernando; Chirivella, Isabel; Perez-Staub, Nathalie; Louvet, Christophe; André, Thierry; Tabah-Fisch, Isabelle; Tournigand, Christophe | Journal Contribution | A1 |
| 161 | 2007 | The assessment of the usefulness of hemilaminectomy without fenestration in the treatment of thoracolumbar disc disease in chondrodystrophic dogs | Sterna, J.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 162 | 2007 | Progression-free survival is a surrogate for survival in advanced colorectal cancer | BUYSE, Marc; BURZYKOWSKI, Tomasz; Carroll, Kevin; Michiels, Stefan; Sargent, Daniel J.; Miller, Langdon L.; Elfring, Gary L.; Pignon, Jean-Pierre; Piedbois, Pascal | Journal Contribution | A1 |
| 163 | 2007 | Testing for trends in dose-response microarray experiments: A comparison of several testing procedures, multiplicity and resampling-based inference | LIN, Dan; SHKEDY, Ziv; Yekutieli, Dani; BURZYKOWSKI, Tomasz; Goehlmann, Hinrich W. H.; De Bondt, An; Perera, Tim; Geerts, Tamara; BIJNENS, Luc | Journal Contribution | A1 |
| 164 | 2007 | Using linear mixed models for normalization of cDNA Microarrays | HALDERMANS, Philippe; SHKEDY, Ziv; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; AERTS, Marc | Journal Contribution | A1 |
| 165 | 2006 | Fitting Frailty Models via Linear Mixed Models using Model Transformation | MASSONNET, Goele; JANSSEN, Paul; BURZYKOWSKI, Tomasz | Proceedings Paper | C1 |
| 166 | 2006 | Resampling Plans for Frailty Models | MASSONNET, Goele; BURZYKOWSKI, Tomasz; JANSSEN, Paul | Journal Contribution | A1 |
| 167 | 2006 | No association of leukemia inhibitory factor (LIF) DNA polymorphisms with multiple sclerosis | VANDERLOCHT, Joris; BURZYKOWSKI, Tomasz; SOMERS, Veerle; STINISSEN, Piet; HELLINGS, Niels | Journal Contribution | A1 |
| 168 | 2006 | Prostate-specific antigen (PSA) alone is not an appropriate surrogate marker of long-term therapeutic benefit in prostate cancer trials | Collette, L; BURZYKOWSKI, Tomasz; Schroder, FH | Journal Contribution | A1 |
| 169 | 2006 | A modeling approach to the analysis of nerve regenerative experiments | VAN SANDEN, Suzy; Wouters, Luc; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Van Remoortere, Marie; MEERT, Theo; BIJNENS, Luc | Journal Contribution | A1 |
| 170 | 2006 | Surrogate threshold effect: An alternative measure for meta-analytic surrogate endpoint validation | BURZYKOWSKI, Tomasz; BUYSE, Marc | Journal Contribution | A1 |
| 171 | 2005 | Performance of classification methods in microarray setting | VAN SANDEN, Suzy; LIN, Dan; BURZYKOWSKI, Tomasz | Journal Contribution | A2 |
| 172 | 2005 | New experimental techniques in genomics: challenges for data processing and analysis | BURZYKOWSKI, Tomasz | Proceedings Paper | C2 |
| 173 | 2005 | Hoge prevalentie voetinfecties in Europa: het Achilles project | BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Abeck, Dietrich; Haneke, Eckart | Journal Contribution | A2 |
| 174 | 2005 | The choice of units | CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert | Book Section | B2 |
| 175 | 2005 | Setting the scene | MOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, Tomasz | Book Section | B2 |
| 176 | 2005 | The history of surrogate endpoint validation | MOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, Tomasz | Book Section | B2 |
| 177 | 2005 | The evaluation of surrogate endpoints | BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; BUYSE, Marc | Book | B1 |
| 178 | 2005 | Notation and motivating studies | MOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, Tomasz | Book Section | B2 |
| 179 | 2005 | A meta-analytic validation framework for continuous outcomes | MOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, Tomasz | Book Section | B2 |
| 180 | 2005 | Statistical interaction in the survival analysis of early breast cancer using registry data: Role of breast conserving surgery and radiotherapy | Vinh-Hung, V; BURZYKOWSKI, Tomasz; Van de Steene, J; Voordeckers, M; Lamote, J; Storme, G | Journal Contribution | A1 |
| 181 | 2005 | A quantitative study of tumor response and progression-free survival as surrogate endpoints for overall survival in first-line treatment of metastatic breast cancer | BURZYKOWSKI, Tomasz; Piccart, MJ; Sledge, G; Carmichael, J; Luck, HJ; Mackey, John R.; Nabholtz, JM; Paridaens, R; Biganzoli, L; Jassem, J; Blohmer, JU; Bontenbal, M; Bonneterre, J; Chan, S; Atalay, G.; Therasse, P; BUYSE, Marc | Journal Contribution | M |
| 182 | 2005 | Effects of taxanes alone or in combination with anthracyclines on tumor response, progression-free survival and overall survival in first-line chemotherapy of patients with metastatic breast cancer: an analysis of 4,256 patients randomized in 12 trials | Piccart, MJ; BURZYKOWSKI, Tomasz; Sledge, G; Luck, HJ; Mackey, John R.; Nabholtz, JM; Paridaens, R; Biganzoli, L; Jassem, J; Blohmer, JU; Bontenbal, M; Bonneterre, J; Chan, S; Atalay, G.; Carmichael, J; BUYSE, Marc; Therasse, P | Journal Contribution | M |
| 183 | 2005 | Vegetables affect the expression of genes involved in anticarcinogenic processes in the colonic mucosa of C57BI/6 female mice | van Breda, SGJ; van Agen, E; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; Kienhuis, AS; KLEINJANS, J.; VAN DELFT, Joost | Journal Contribution | A1 |
| 184 | 2005 | Vegetables affect the expression of genes involved in carcinogenic and anticarcinogenic processes in the lungs of female C57BI/6 mice | van Breda, SG; van Agen, E; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; KLEINJANS, J.; VAN DELFT, Joost | Journal Contribution | A1 |
| 185 | 2005 | Is prostate-specific antigen a valid surrogate end point for survival in hormonally treated patients with metastatic prostate cancer? Joint research of the European Organisation for Research and Treatment of Cancer, the Limburgs Universitair Centrum, and AstraZeneca Pharmaceuticals | Collette, L; BURZYKOWSKI, Tomasz; Carroll, KJ; Newling, D; Morris, T; Schroder, FH | Journal Contribution | A1 |
| 186 | 2005 | A version of the EM algorithm for proportional hazard model with random effects | CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 187 | 2005 | Joint modelling of repeated measurements and event time: Application to performance traits and survival of lambs bred in sub-humid tropics | NGUTI, Rosemary; BURZYKOWSKI, Tomasz; Rowlands, J; RENARD, Didier; JANSSEN, Paul | Journal Contribution | A1 |
| 188 | 2005 | Progression-free survival (PFS) as a surrogate for overall survival (OS) in patients with advanced colorectal cancer: An analysis of 3159 patients randomized in 11 trials. | BUYSE, Marc; BURZYKOWSKI, Tomasz; Carroll, K; Michiels, Stefan; Pignon, JP; Piedbois, P | Journal Contribution | M |
| 189 | 2005 | The effects of foot disease on quality of life: results of the Achilles Project | Katsambas, A.; Abeck, D.; Haneke, E.; van der Kerkhof, P.; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Marynissen, Greet | Journal Contribution | A1 |
| 190 | 2005 | Risk factors for bovine herpesvirus-1 seropositivity | Boelaert, Frank; Speybroeck, N.; de Kruif, A.; AERTS, Marc; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Berkvens, Dirk | Journal Contribution | A1 |
| 191 | 2005 | Design and analysis of drug combination experiments | STRAETEMANS, Roel; O'BRIEN, Timothy; WOUTERS, Luc; Van Dun, J; Janicot, M; BIJNENS, Luc; BURZYKOWSKI, Tomasz; AERTS, Marc | Journal Contribution | A1 |
| 192 | 2004 | Predicted and observed thyroid cancer incidence in Poland after year 1986 | BURZYKOWSKI, Tomasz; Chmielarczyk, Wiktor | Journal Contribution | A3 |
| 193 | 2004 | Prentice's approach and the meta-analytic paradigm: a reflection on the role of statistics in the evaluation of surrogate endpoints | ALONSO ABAD, Ariel; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; RENARD, Didier; GEYS, Helena; SHKEDY, Ziv; TIBALDI, Fabian; CORTINAS ABRAHANTES, Jose; BUYSE, Marc | Journal Contribution | A1 |
| 194 | 2004 | Choice of units of analysis and modeling strategies in multilevel hierarchical models | CORTINAS ABRAHANTES, Jose; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; SHKEDY, Ziv; ALONSO ABAD, Ariel; RENARD, Didier | Journal Contribution | A1 |
| 195 | 2004 | A perspective on surrogate endpoints in controlled clinical trials | MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; ALONSO ABAD, Ariel; BUYSE, Marc | Journal Contribution | A1 |
| 196 | 2004 | Efficacy of oral adjuvant therapy after resection of colorectal cancer: 5-year results from three randomized trials | Sakamoto, J.; Ohashi, Y.; Hamada, C.; BUYSE, Marc; BURZYKOWSKI, Tomasz; Piedbois, P. | Journal Contribution | A1 |
| 197 | 2004 | The validation of surrogate endpoints by using data from randomized clinical trials: a case-study in advanced colorectal cancer | BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; BUYSE, Marc | Journal Contribution | A1 |
| 198 | 2004 | Axillary sentinel node and tumour-related factors associated with non-sentinel node involvement in breast cancer | Cserni, Gabor; BURZYKOWSKI, Tomasz; Vinh-Hung, Vincent; Kocsis, Lajos; Boross, Gabor; Sinko, Maria; Tarjan, Miklos; Bori, Rita; Rajtar, Maria; Tekle, Eliza; Maraz, Robert; Baltas, Bela; Svebis, Mihaly | Journal Contribution | A1 |
| 199 | 2004 | Pseudo-likelihood estimation for a marginal multivariate survival model | TIBALDI, Fabian; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; GEYS, Helena | Journal Contribution | A1 |
| 200 | 2004 | Is prostate-specific antigen a surrogate for survival in advanced prostate cancer? | Collette, L; BURZYKOWSKI, Tomasz; Carroll, K; Newling, D; Morris, T; Schroder, F | Journal Contribution | M |
| 201 | 2003 | A version of the EM algorithm for proportional hazards models with random effects | CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz | Proceedings Paper | C2 |
| 202 | 2003 | A hierarchical Bayesian approach for the evaluation of surrogate endpoints in multiple randomized clinical trials | SHKEDY, Ziv; TORRES BARBOSA, Franz; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert | Proceedings Paper | C2 |
| 203 | 2003 | Statistical analysis of data from single molecule experiment | BURZYKOWSKI, Tomasz; SZUBIAKOWSKI, Jacek; Ryden, Tobias | Proceedings Paper | C1 |
| 204 | 2003 | Validation of biomarkers as surrogates for clinical endpoints | BUYSE, Marc; VANGENEUGDEN, Tony; BIJNENS, Luc; RENARD, Didier; BURZYKOWSKI, Tomasz; GEYS, Helena; MOLENBERGHS, Geert | Book Section | B3 |
| 205 | 2003 | Multivariate analysis of risk factors for development of duodenal ulcer in Helicobacter pylori-infected patients | Regula, J.; Hennig, E.; BURZYKOWSKI, Tomasz; Orlowska, J.; Przytulski, K.; Polkowski, M.; Dziurkowska-Marek, A.; Marek, T.; Nowak, A.; Butruk, E.; Ostrowski, J. | Journal Contribution | A1 |
| 206 | 2003 | Analysis of photon count data from single-molecule fluorescence experiments | BURZYKOWSKI, Tomasz; SZUBIAKOWSKI, Jacek; Ryden, T. | Journal Contribution | A1 |
| 207 | 2003 | Simplified hierarchical linear models for the evaluation of surrogate endpoints | TIBALDI, Fabian; CORTINAS ABRAHANTES, Jose; MOLENBERGHS, Geert; RENARD, Didier; BURZYKOWSKI, Tomasz; BUYSE, Marc; Parmar, Mahesh; Stijnen, Theo; Wolfinger, Russ | Journal Contribution | A1 |
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