BURZYKOWSKI, Tomasz

Full Name
BURZYKOWSKI, Tomasz
Email
tomasz.burzykowski@uhasselt.be
 
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Publications

Results 1-248 of 249 (Search time: 0.002 seconds).

Issue DateTitleContributor(s)TypeCat.
12024The BoostingBECKER, Thijs; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA2
22024Unveiling the Molecular Mechanism of Trastuzumab Resistance in SKBR3 and BT474 Cell Lines for HER2 Positive Breast CancerKokot, Anna; Gadakh, Sachin; Saha, Indrajit; Gajda, Ewa; Lazniewski, Michal; Rakshit, Somnath; Sengupta, Kaustav; Mollah, Ayatullah Faruk; Denkiewicz, Michal; GORCZAK, Katarzyna; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; Plewczynski, DariuszJournal ContributionA1
32023Over-accrual in Bayesian adaptive trials with continuous futility stoppingGARCIA BARRADO, Leandro; BURZYKOWSKI, TomaszJournal ContributionA1
42023Operational characteristics of univariate generalized pairwise comparisons with missing dataDELTUVAITE-THOMAS, Vaiva; BURZYKOWSKI, TomaszJournal ContributionA1
52023Trial Design for Cancer Immunotherapy: A Methodological ToolkitSaad, Everardo D.; Coart, Elisabeth; DELTUVAITE-THOMAS, Vaiva; GARCIA BARRADO, Leandro; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
62023Availability of Third Molars as Donor Teeth for Autotransplantation to Replace Congenitally Absent Second Premolars in Children and Young AdultsBilinska, Malgorzata; BURZYKOWSKI, Tomasz; Plakwicz, Pawel; Zadurska, Malgorzata; Czochrowska, Ewa MonikaJournal ContributionA1
72023Generalized linear modelsBURZYKOWSKI, Tomasz; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, DirkJournal ContributionA2
82023Validation of machine learning algorithmsBURZYKOWSKI, Tomasz; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, DirkJournal ContributionA2
92023Introduction to machine learningBURZYKOWSKI, Tomasz; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; VALKENBORG, DirkJournal ContributionA2
102023Support vector machinesVALKENBORG, Dirk; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, TomaszJournal ContributionA2
112023Decision trees and random forestsBECKER, Thijs; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionA1
122023Minimization in randomized clinical trialsCoart, Elisabeth; Bamps, Perrine; Quinaux, Emmanuel; Sturbois, Geneviève; Saad, Everardo D; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
132023Generalized pairwise comparisons for censored data: An overviewDELTUVAITE-THOMAS, Vaiva; VERBEECK, Johan; BURZYKOWSKI, Tomasz; BUYSE, Marc; Tournigand, Christophe; MOLENBERGHS, Geert; THAS, OlivierJournal ContributionA1
142023High-dimensional dataGEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA2
152023Supervised learningVALKENBORG, Dirk; GEUBBELMANS, Melvin; ROUSSEAU, Axel-Jan; BURZYKOWSKI, TomaszJournal ContributionA1
162023Unsupervised learningVALKENBORG, Dirk; ROUSSEAU, Axel-Jan; GEUBBELMANS, Melvin; BURZYKOWSKI, TomaszJournal ContributionA2
172023Machine learning approach for the prediction of the number of sulphur atoms in peptides using the theoretical aggregated isotope distributionAGTEN, Annelies; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionA1
182022Relationship Among the Foraminal Area and Demographic and Clinical Characteristics of Patients with Low Back PainLorenc , Tomasz; BURZYKOWSKI, TomaszJournal ContributionA1
192022Clinical Trial Endpoints in Metastatic Cancer: Using Individual Participant Data to Inform Future Trials MethodologyGoldberg, Richard M.; Adams, Richard; BUYSE, Marc; Eng, Cathy; Grothey, Axel; Andre, Thierry; Sobrero, Alberto F.; Lichtman, Stuart M.; Benson, Al B.; Punt, Cornelis J. A.; Maughan, Tim; BURZYKOWSKI, Tomasz; Sommeijer, Dirkje; Saad, Everardo D.; Shi, Qian; Coart, Elisabeth; Chibaudel, Benoist; Koopman, Miriam; Schmoll, Hans-Joachim; Yoshino, Takayuki; Taieb, Julien; Tebbutt, Niall C.; Zalcberg, John; Tabernero, Josep; Van Cutsem , Eric; Matheson, Alastair; de Gramont, AimeryJournal ContributionA1
202022Surrogacy Beyond Prognosis: The Importance of “Trial-Level” SurrogacyBUYSE, Marc; Saad, Everardo D.; BURZYKOWSKI, Tomasz; Regan, Meredith M.; Sweeney, Christopher S.Journal ContributionA1
212022The case against censoring of progression-free survival in cancer clinical trials - A pandemic shutdown as an illustrationJamoul, Corinne; Collette, Laurence; Coart, Elisabeth; D'Hollander, Koenraad; BURZYKOWSKI, Tomasz; Saad, Everardo D; BUYSE, MarcJournal ContributionA1
222022Operational characteristics of generalized pairwise comparisons for hierarchically ordered endpointsDELTUVAITE-THOMAS, Vaiva; BURZYKOWSKI, TomaszJournal ContributionA1
232022Using an interim analysis based exclusively on an early outcome in a randomized clinical trial with a long-term clinical endpointBarrado, Leandro Garcia; BURZYKOWSKI, Tomasz; LEGRAND, Catherine; BUYSE, MarcJournal ContributionA1
242022Semi-parametric accelerated failure-time model: A useful alternative to the proportional-hazards model in cancer clinical trialsBURZYKOWSKI, TomaszJournal ContributionA1
252021Status of the alveolar bone after autotransplantation of developing premolars to the anterior maxilla assessed by CBCT measurementsPlakwicz, Pawel; Andreasen, Jens Ove; Gorska, Renata; BURZYKOWSKI, Tomasz; Czochrowska, EwaJournal ContributionA1
262021Explanatory Model Analysis. Explore, Explain, and Examine Predictive ModelsBiecek, Przemyslaw; BURZYKOWSKI, TomaszBookB1
272021Evaluation of surrogate endpointsMOLENBERGHS, Geert; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; BUYSE, Marc; ALONSO ABAD, Ariel; VAN DER ELST, WimBook SectionB2
282021Predicting the number of sulfur atoms in peptides and small proteins based on the observed aggregated isotope distributionCLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
292020Unbiasedness and efficiency of non-parametric and UMVUE estimators of the probabilistic index and related statisticsVERBEECK, Johan; DELTUVAITE-THOMAS, Vaiva; BERCKMOES, Ben; BURZYKOWSKI, Tomasz; AERTS, Marc; THAS, Olivier; BUYSE, Marc; MOLENBERGHS, GeertJournal ContributionA1
302020Progression-free survival (PFS) as a surrogate endpoint for overall survival (OS) in advanced/recurrent gastric cancer (AGC) treatment: Individual-patient-data (IPD) based meta-analysis of randomized trialsOba, Koji; Paoletto, Xavier; Bang, Yung-Jue; Bouche, Olivier; Ducreux, Michel; Michiels, Stefan; Moehler, MarkusH; Morita, Satoshi; Ohashi, Yasuo; Sakamoto, Junichi; Sasako, Mitsuru; Shitara, Kohei; Van Cutsem, Eric; BUYSE, Marc; BURZYKOWSKI, TomaszJournal ContributionM
312020Bayesian biomarker-driven outcome-adaptive randomization with an imperfect biomarker assayGARCIA BARRADO, Leandro; BURZYKOWSKI, TomaszJournal ContributionA1
322020Meta-analytic approach to evaluation of surrogate endpointsBURZYKOWSKI, Tomasz; BUYSE, Marc; MOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; SHKEDY, ZivBook SectionB2
332020Visualizing the agreement of peptide assignments between different search enginesAGTEN, Annelies; VAN HOUTVEN, Joris; Askenazi, M; BURZYKOWSKI, Tomasz; Laukens, K; VALKENBORG, DirkJournal ContributionA1
342020The (generalized) hydrogen rule for organic moleculesCLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
352020A “Refined Hydrogen Rule” and a “Refined Hydrogen and Halogen Rule” for Organic MoleculesCLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
362019Disease-free survival as a surrogate for overall survival in patients with HER2-positive, early breast cancer in trials of adjuvant trastuzumab for up to 1 year: a systematic review and meta-analysisSaad, Everardo D.; Squifflet, Pierre; BURZYKOWSKI, Tomasz; Quinaux, Emmanuel; Delaloge, Suzette; Mavroudis, Dimitris; Perez, Edith; Piccart-Gebhart, Martine; Schneider, Bryan P.; Slamon, Dennis; Wolmark, Norman; BUYSE, MarcJournal ContributionA1
372019The impact of the method of extracting metabolic signal from H-1-NMR data on the classification of samples: A case study of binning and BATMAN in lung cancerPADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; LOUIS, Evelyne; ADRIAENSENS, Peter; BURZYKOWSKI, TomaszJournal ContributionA1
382019Detection of atypical data in multicenter clinical trials using unsupervised statistical monitoringTrotta, Laura; Kabeya, Yuusuke; BUYSE, Marc; Doffagne, Erik; Venet, David; Desmet, Lieven; BURZYKOWSKI, Tomasz; Tsuburaya, Akira; Yoshida, Kazuhiro; Miyashita, Yumi; Morita, Satoshi; Sakamoto, Junichi; Praveen, Paurush; Oba, KojiJournal ContributionA1
392019A Poisson approach to the validation of failure time surrogate endpoints in individual patient data meta-analysesRotolo, Federico; PAOLETTI, Xavier; BURZYKOWSKI, Tomasz; BUYSE, Marc; Michiels, StefanJournal ContributionA1
402019Joint modelling of a binary and a continuous outcome measured at two cycles to determine the optimal doseEzzalfani, Monia; BURZYKOWSKI, Tomasz; PAOLETTI, XavierJournal ContributionA1
412019Evaluation of Continuous Tumor-Size-Based End Points as Surrogates for Overall Survival in Randomized Clinical Trials in Metastatic Colorectal CancerBURZYKOWSKI, Tomasz; Coart, E.; Saad, E.D.; Shi, Q.; Sommeijer, D.W.; Bokemeyer, C.; Díaz-Rubio, E.; Douillard, Jean-Yves; Falcone, A.; Fuchs, C.; Goldberg, R.M.; Hecht, R.; Hoff, P.M.; Hurwitz, H.; Kabbinavar, F.F.; Koopman, M.; Maughan, T.; Punt, C.J.A.; Saltz, L.; Schmoll, Hans-Joachim; Seymour, M.T.; Tebbutt, N.C.; Tournigand, C.; Van Cutsem, E.; de Gramont, A.; Zalcberg, J.R.; BUYSE, MarcJournal ContributionA1
422019The retrospective study of 93 patients with transmigration of mandibular canine and a comparative analysis with a control groupPlakwicz, Pawel; Abramczyk, Joanna; Wojtaszek-Lis, Julita; Sajkowska, Jolanta; Warych, Barbara; Gawron, Katarzyna; BURZYKOWSKI, Tomasz; Zadurska, Malgorzata; Czochrowska, Ewa Monika; Wojtowicz, Andrzej; Gorska, Renata; Kukula, KrzysztofJournal ContributionA1
432019Chronological Trends in Progression-Free, Overall, and Post-Progression Survival in First-Line Therapy for Advanced NSCLCRutkowski, Jacek; Saad, Everardo D.; BURZYKOWSKI, Tomasz; BUYSE, Marc; Jassem, JacekJournal ContributionA1
442019A multivariate linear model for investigating the association between gene-module co-expression and a continuous covariatePADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; Salo, Perttu; Perola, Markus; BURZYKOWSKI, TomaszJournal ContributionA1
452019A Bayesian Framework Allowing Incorporation of Retrospective Information in Prospective Diagnostic Biomarker-Validation DesignsGARCIA BARRADO, Leandro; Coart, Els; BURZYKOWSKI, TomaszJournal ContributionA1
462019A Multivariate Negative-Binomial Model with Random Effects for Differential Gene-Expression Analysis of Correlated mRNA Sequencing DataKazakiewicz, D; CLAESEN, Jurgen; GORCZAK, Katarzyna; Plewczynski, D; BURZYKOWSKI, TomaszJournal ContributionA1
472019A Conceptual Framework for Abundance Estimation of Genomic Targets in the Presence of Ambiguous Short Sequencing ReadsGORCZAK, Katarzyna; CLAESEN, Jurgen; BURZYKOWSKI, TomaszJournal ContributionA1
482019De novo prediction of the elemental composition of peptides and proteins based on a single massCLAESEN, Jurgen; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
492019Experimental design in quantitative proteomicsBURZYKOWSKI, Tomasz; CLAESEN, Jurgen; VALKENBORG, DirkBook SectionB2
502018The search for surrogate endpoints for immunotherapy trialsBUYSE, Marc; BURZYKOWSKI, Tomasz; Saad, Everardo D.Journal ContributionA2
512018Comprehensive analysis of cancer stemnessMalta, Tathiane M.; Sokolov, Artem; Gentles, Andrew J.; BURZYKOWSKI, Tomasz; Poisson, Laila; Weinstein, John; Kaminska, Bozena; Huelsken, Joerg; Omberg, Larsson; Gevaert, Olivier; Colaprico, Antonio; Czerwinska, Patrycja; Mazurek, Sylwia; Mishra, Lopa; Heyn, Holger; Krasnitz, Alex; Godwin, Andrew K.; Lazar, Alexander J.; Stuart, Joshua M.; Hoadley, Katherine; Laird, Peter W.; Noushmehr, Houtan; Wiznerowicz, MaciejJournal ContributionM
522018Machine Learning Identifies Stemness Features Associated with Oncogenic DedifferentiationMalta, Tathiane M.; Sokolov, Artem; Gentles, Andrew J.; BURZYKOWSKI, Tomasz; Poisson, Laila; Weinstein, John N.; Kaminska, Bozena; Huelsken, Joerg; Omberg, Larsson; Gevaert, Olivier; Colaprico, Antonio; Czerwinska, Patrycja; Mazurek, Sylwia; Mishra, Lopa; Heyn, Holger; Krasnitz, Alex; Godwin, Andrew K.; Lazar, Alexander J.; Stuart, Joshua M.; Hoadley, Katherine A.; Laird, Peter W.; Noushmehr, Houtan; Wiznerowicz, MaciejJournal ContributionA1
532018Sequential double cross-validation for assessment of added predictive ability in high-dimensional omic applicationsRodriguez-Girondo, Mar; Salo, Perttu; BURZYKOWSKI, Tomasz; Perola, Markus; HOUWING-DUISTERMAAT, Jeanne; Mertens, BartJournal ContributionA1
542018Understanding and Communicating Measures of Treatment Effect on Survival: Can We Do Better?Saad, Everardo D.; Zalcberg, John R.; Peron, Julien; Coart, Elisabeth; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
552018Re-induction using whole cell melanoma vaccine genetically modified to melanoma stem cells-like beyond recurrence extends long term survival of high risk resected patients - updated resultsMackiewicz, Jacek; BURZYKOWSKI, Tomasz; Izycki, Dariusz; Mackiewicz, AndrzejJournal ContributionA1
562018Statistical evaluation of surrogate endpoints in cancer clinical trialsBUYSE, Marc; MOLENBERGHS, Geert; PAOLETTI, Xavier; Oba, K.; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, TomaszBook SectionB2
572017Applied Surrogate Endpoint Evaluation Methods with SAS and RALONSO ABAD, Ariel; BIGIRUMURAME, Theophile; BURZYKOWSKI, Tomasz; BUYSE, Marc; MOLENBERGHS, Geert; MUCHENE, Leacky; PERUALILA, Nolen Joy; SHKEDY, Ziv; VAN DER ELST, WimBookB1
582017Evaluation of failure time surrogate endpoints in individual patient data meta-analyses of randomized clinical trials. A poisson approachRotolo, Federico; PAOLETTI, Xavier; BURZYKOWSKI, Tomasz; BUYSE, Marc; Michiels, StefanJournal ContributionM
592017Adoption of Pathologic Complete Response as a Surrogate End Point in Neoadjuvant Trials in HER2-Positive Breast Cancer Still an Open QuestionBURZYKOWSKI, Tomasz; Saad, Everardo D.; BUYSE, MarcJournal ContributionA1
602017Precision medicine needs randomized clinical trialsSaad, Everardo D.; PAOLETTI, Xavier; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
612017Use of the Beta-Binomial Model for Central Statistical Monitoring of Multicenter Clinical TrialsDesmet, Lieven; Venet, David; Doffagne, Erik; Timmermans, Catherine; LEGRAND, Catherine; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
622017Estimation of diagnostic accuracy of a combination of continuous biomarkers allowing for conditional dependence between the biomarkers and the imperfect reference-testGARCIA BARRADO, Leandro; Coart, Els; BURZYKOWSKI, TomaszJournal ContributionA1
632017An open label phase II study evaluating first-line EGFR tyrosine kinase inhibitor erlotinib in non-small cell lung cancer patients with tumors showing high EGFR gene copy numberSzutowicz-Zielinska, Ewa; Konopa, Krzysztof; Kowalczyk, Anna; Suszko-Kazarnowicz, Malgorzata; Duchnowska, Renata; Szczesna, Aleksandra; Ratajska, Magdalena; Sowa, Aleksander; Limon, Janusz; Biernat, Wojciech; BURZYKOWSKI, Tomasz; Jassem, Jacek; Dziadziuszko, RafalJournal ContributionA1
642017The Analysis of Peptide-Centric Mass-Spectrometry Data Utilizing Information About the Expected Isotope DistributionBURZYKOWSKI, Tomasz; CLAESEN, Jurgen; VALKENBORG, DirkBook SectionB2
652016Statistical monitoring of data quality and consistency in the Stomach Cancer Adjuvant Multi-institutional Trial Group TrialTimmermans, Catherine; Doffagne, Erik; Venet, David; Desmet, Lieven; LEGRAND, Catherine; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
662016Statistical evaluation of surrogate endpoints with examples from cancer clinical trialsBUYSE, Marc; MOLENBERGHS, Geert; PAOLETTI, Xavier; Oba, Koji; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, TomaszJournal ContributionA1
672016Neoadjuvant as Future for Drug Development in Breast Cancer-LetterBUYSE, Marc; BURZYKOWSKI, Tomasz; Saad, Everardo D.Journal ContributionA1
682016Development of a diagnostic test based on multiple continuous biomarkers with an imperfect reference testGARCIA BARRADO, Leandro; Coart, Els; BURZYKOWSKI, TomaszJournal ContributionA1
692016Normalisation of brain spectroscopy findings in Niemann-Pick disease type C patients treated with miglustatSedel, Frédéric; Chabrol, Brigitte; Audoin, Bertrand; Kaphan, Elsa; Tranchant, Christine; BURZYKOWSKI, Tomasz; Tourbah, Ayman; Vanier, Marie T.; Galanaud, DamienJournal ContributionA1
702016COMPUTATIONAL METHODS AND CHALLENGES IN HYDROGEN/DEUTERIUM EXCHANGE MASS SPECTROMETRYCLAESEN, Jurgen; BURZYKOWSKI, TomaszJournal ContributionA1
712016The Detection of Metabolite-Mediated Gene Module Co-Expression Using Multivariate Linear ModelsPADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; Perola, Markus; Salo, Perttu; BURZYKOWSKI, TomaszJournal ContributionA1
722016Adaptive Randomization of Neratinib in Early Breast CancerBUYSE, Marc; Saad, E.; BURZYKOWSKI, TomaszJournal ContributionA1
732016An Information-Theoretic Approach for the Evaluation of Surrogate Endpoints Based on Causal InferenceALONSO ABAD, Ariel; VAN DER ELST, Wim; MOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, TomaszJournal ContributionA1
742016Data-driven risk identification in phase III clinical trials using central statistical monitoringTimmermans, Catherine; Venet, David; BURZYKOWSKI, TomaszJournal ContributionA1
752015Event-Free Survival Is a Surrogate for Overall Survival in Patients Treated for Acute Myeloid LeukemiaSchlenk, Richard F.; Doehner, Hartmut; Doehner, Konstanze; Ganser, Arnold; Heuser, Michael; Benner, Axel; BUYSE, Marc; BURZYKOWSKI, TomaszJournal ContributionM
762015Surrogate properties of survival endpoints in metastatic soft-tissue sarcoma: A meta-analysis.Savina, Marion; LITIERE, Saskia; Penel, Nicolas; Rondeau, Virginie; BURZYKOWSKI, Tomasz; Toulmonde, Maud; Italiano, Antoine; Mathoulin-Pelissier, Simone; Bellera, Carine A.Journal ContributionM
772015Correcting for the Absence of a Gold Standard Improves Diagnostic Accuracy of Biomarkers in Alzheimer's DiseaseCoart, Els; GARCIA BARRADO, Leandro; Duits, Flora H.; Scheltens, Philip; van der Flier, Wiesje M.; Teunissen, Charlotte E.; van der Vies, Saskia M.; BURZYKOWSKI, TomaszJournal ContributionA1
782015A hidden Markov-model for gene mapping based on whole-genome next generation sequencing dataCLAESEN, Jurgen; BURZYKOWSKI, TomaszJournal ContributionA1
792015A Nonhomogeneous Hidden Markov Model for Gene Mapping Based on Next-Generation Sequencing DataZAMANZAD GHAVIDEL, Fatemeh; CLAESEN, Jurgen; BURZYKOWSKI, TomaszJournal ContributionA1
802015Whole Cell Therapeutic Vaccine Modified With Hyper-IL6 for Combinational Treatment of Nonresected Advanced MelanomaJacek, Mackiewicz; Aldona, Karczewska-Dzionk; Maria, Laciak; Malgorzata, Kapcinska; Maciej, Wiznerowicz; BURZYKOWSKI, Tomasz; Zakowska, Monika; Stefan, Rose-John; Andrzej, MackiewiczJournal ContributionA1
812015PTEN Loss Is Associated with Worse Outcome in HER2-Amplified Breast Cancer Patients but Is Not Associated with Trastuzumab ResistanceStern, Howard M.; Gardner, Humphrey; BURZYKOWSKI, Tomasz; Elatre, Wafaa; O'Brien, Carol; Lackner, Mark R.; Pestano, Gary A.; Santiago, Angela; Villalobos, Ivonne; Eiermann, Wolfgang; Pienkowski, Tadeusz; Martin, Miguel; Robert, Nicholas; Crown, John; Nuciforo, Paolo; Bee, Valerie; Mackey, John; Slamon, Dennis J.; Press, Michael F.Journal ContributionA1
822015Transferring Cut-off Values between Assays for Cerebrospinal Fluid Alzheimer's Disease BiomarkersGARCIA BARRADO, Leandro; Coart, Els; Vanderstichele, Hugo M. J.; BURZYKOWSKI, TomaszJournal ContributionA1
832015Differences in the Elemental Isotope Definition May Lead to Errors in Modern Mass-Spectrometry-Based ProteomicsCLAESEN, Jurgen; Lermyte, Frederik; Sobott, Frank; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionA1
842015On the relationship between the causal-inference and meta-analytic paradigms for the validation of surrogate endpointsALONSO ABAD, Ariel; VAN DER ELST, Wim; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
852015Biomarker‑based surrogate endpointsBUYSE, Marc; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; ALONSO ABAD, ArielBook SectionB2
862014Implementation Issues in Adaptive Design TrialsDanielson, Linda; Carlier, Jerome; BURZYKOWSKI, Tomasz; BUYSE, MarcBook SectionB2
872014Linear mixed-effects models for central statistical monitoring of multicenter clinical trialsDesmet, L.; Venet, D.; Doffagne, E.; Timmermans, C.; BURZYKOWSKI, Tomasz; LEGRAND, Catherine; BUYSE, MarcJournal ContributionA1
882014Comparison of the Mahalanobis Distance and Pearson's χ(2) Statistic as Measures of Similarity of Isotope Patterns.ZAMANZAD GHAVIDEL, Fatemeh; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionA1
892014CXCL5 as a potential novel prognostic factor in early stage non-small cell lung cancer: results of a study of expression levels of 23 genesKowalczuk, Oksana; BURZYKOWSKI, Tomasz; Niklinska, Wieslawa Ewa; Kozlowski, Miroslaw; Chyczewski, Lech; Niklinski, JacekJournal ContributionA1
902014The use of the isotopic distribution as a complementary quality metric to assess tandem mass spectra resultsZAMANZAD GHAVIDEL, Fatemeh; Mertens, Inge; Baggerman, Geert; Laukens, Kris; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionA1
912013Estimation of Optimally Combined-Biomarker Accuracy in the Absence of a Gold Standard Reference TestGARCIA BARRADO, Leandro; COART, Elisabeth; BURZYKOWSKI, TomaszProceedings PaperC1
922013Linear Mixed Effects Models Using R. : A Step-by-Step ApproachGałecki, Andrzej; BURZYKOWSKI, TomaszBookB1
932013Evaluation of Progression Free Survival as a surrogate for Overall Survival for prostate cancer treatment: Software developmentBIGIRUMURAME, Theophile; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; VAN SANDEN, Suzy; THILAKARATHNE, Pushpike; Dries, JorisConference MaterialC2
942013Review: Clinical Trial Methodology: Surrogate endpoints: when should they be used?MOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
952013Immunotargeting melanoma stem cells with Hyper-IL6 modified whole cell therapeutic vaccine (AGI-101H) in patients with advanced melanoma - a joint analysis of two phase 2 studiesMackiewicz, Jacek; Wysocki, P.; Karczewska-Dzionka, A.; Kwiatkowska-Borowczyk, E.; Kozlowska, A.; BURZYKOWSKI, Tomasz; Rose-John, S.; Wiznerowicz, M.; Mackiewicz, AndrzejJournal ContributionM
962013Statistical evaluation of surrogate endpoints in clinical studiesMOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; BURZYKOWSKI, Tomasz; BUYSE, MarcBook SectionB2
972013A Markov-chain-based regression model with random effects for the analysis of 18O-labelled mass spectraZHU, Qi; BURZYKOWSKI, TomaszJournal ContributionA1
982013Evaluation of normalization methods to pave the way towards large-scale LC-MS-based metabolomic profiling experimentsEJIGU, Bedilu; VALKENBORG, Dirk; Baggerman, Geert; Vanaerschot, Manu; Witters, Erwin; Dujardin, Jean-Claude; BURZYKOWSKI, Tomasz; Berg, MayaJournal ContributionA1
992013Role of chemotherapy for advanced/recurrent gastric cancer: An individual-patient-data meta-analysisOba, Koji; PAOLETTI, Xavier; Bang, Yung-Jue; Bleiberg, Harry; BURZYKOWSKI, Tomasz; Fuse, Nozomu; Michiels, Stefan; Morita, Satoshi; Ohashi, Yasuo; Pignon, Jean-Pierre; Rougier, Philippe; Pompidou, Georges; Sakamoto, Junichi; Sargent, Daniel; Sasako, Mitsuru; Shitara, Kohei; Tsuburaya, Akira; Van Cutsem, Eric; BUYSE, MarcJournal ContributionA1
1002013Markers for nutrition studies: review of criteria for the evaluation of markersde Vries, Jan; Antoine, Jean-Michel; BURZYKOWSKI, Tomasz; Chiodini, Alessandro; Gibney, Mike; Kuhnle, Gunter; Meheust, Agnes; Pijls, Loek; Rowland, IanJournal ContributionA1
1012013Simultaneous Mapping of Multiple Gene Loci with Pooled SegregantsCLAESEN, Jurgen; CLEMENT, Lieven; SHKEDY, Ziv; Foulquié-Moreno, Maria R.; BURZYKOWSKI, TomaszJournal ContributionA1
1022013Disease-Free Survival as a Surrogate for Overall Survival in Adjuvant Trials of Gastric Cancer: A Meta-AnalysisOba, Koji; PAOLETTI, Xavier; Alberts, Steven; Bang, Yung-Jue; Benedetti, Jacqueline; Bleiberg, Harry; CATALANO, Paul; Lordick, Florian; Michiels, Stefan; Morita, Satoshi; Ohashi, Yasuo; Pignon, Jean-pierre; Rougier, Philippe; Sasako, Mitsuru; Sakamoto, Junichi; Sargent, Daniel; Shitara, Kohei; Cutsem, Eric Van; BUYSE, Marc; BURZYKOWSKI, TomaszJournal ContributionA1
1032013Progression-Free Survival as a Surrogate for Overall Survival in Advanced/Recurrent Gastric Cancer Trials: A Meta-AnalysisPAOLETTI, Xavier; Oba, Koji; Bang, Yung-Jue; Bleiberg, Harry; Boku, Narikazu; Bouche, Olivier; Fuse, Nozomu; Michiels, Stefan; Moehler, Markus; Morita, Satoshi; Ohashi, Yasuo; Ohtsu, Atsushi; Roth, Arnaud; Rougier, Philippe; Sakamoto, Junichi; Sargent, Daniel; Sasako, Mitsuru; Shitara, Kohei; Thuss-Patience, Peter; Van Cutsem, Eric; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
1042013BRAIN: A Universal Tool for High-Throughput Calculations of the Isotopic Distribution for Mass SpectrometryDittwald, Piotr; CLAESEN, Jurgen; BURZYKOWSKI, Tomasz; VALKENBORG, Dirk; Gambin, AnnaJournal ContributionA1
1052012Design and analysis of experiments: `omics’ does not mean ‘an exception’BURZYKOWSKI, TomaszProceedings PaperC1
1062012Normalization of large-scale mass spectrometry-based metabolic profiling experimentsEJIGU, Bedilu; VALKENBORG, Dirk; Berg, Maya; Dujardin, Jean-Claude; BURZYKOWSKI, TomaszConference MaterialC2
1072012Simultaneous Inferences for Ratio Parameters Using Multiple Contrasts TestLIN, Dan; Djira, Gemechis D.; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Hothorn, Ludwig A.Book SectionB2
1082012Single Contrast TestsLin, Dan; SHKEDY, Ziv; Yekutieli, Daniel; BURZYKOWSKI, Tomasz; Göhlmann, Hinrich W.H.; De Bondt, An; Verbeke, Tobias; BIJNENS, LucBook SectionB2
1092012Reply to the Comment on: "An efficient method to calculate the aggregated isotopic distribution and exact center-masses"CLAESEN, Jurgen; Dittwald, Piotr; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionM
1102012The isotopic distribution conundrumVALKENBORG, Dirk; Mertens, Inge; Lemiere, Filip; Witters, Erwin; BURZYKOWSKI, TomaszJournal ContributionA1
1112012A statistical approach to central monitoring of data quality in clinical trialsVenet, David; Doffagne, Erik; BURZYKOWSKI, Tomasz; Beckers, Francois; Tellier, Yves; Genevois-Marlin, Eric; Becker, Ursula; Bee, Valerie; Wilson, Veronique; LEGRAND, Catherine; BUYSE, MarcJournal ContributionA1
1122012Predicting Treatment Effect from Surrogate Endpoints and Historical Trials: An Extrapolation Involving Probabilities of a Binary Outcome or Survival to a Specific TimeBaker, Stuart G.; Sargent, Daniel J.; BUYSE, Marc; BURZYKOWSKI, TomaszJournal ContributionA1
1132012Long-term survival of high-risk melanoma patients immunized with a Hyper-IL-6-modified allogeneic whole-cell vaccine after complete resectionMackiewicz, Andrzej; Mackiewicz, Jacek; Wysocki, Piotr J.; Wiznerowicz, Maciej; Kapcinska, Malgorzata; Laciak, Maria; Rose-John, Stefan; Izycki, Dariusz; BURZYKOWSKI, Tomasz; Karczewska-Dzionk, AldonaJournal ContributionA1
1142012An Efficient Method to Calculate the Aggregated Isotopic Distribution and Exact Center-MassesCLAESEN, Jurgen; Dittwald, Piotr; BURZYKOWSKI, Tomasz; VALKENBORG, DirkJournal ContributionA1
1152012GENOMIC BIOMARKERS FOR A BINARY CLINICAL OUTCOME IN EARLY DRUG DEVELOPMENT MICROARRAY EXPERIMENTSVAN SANDEN, Suzy; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Gohlmann, Hinrich W. H.; TALLOEN, Willem; BIJNENS, LucJournal ContributionA1
1162011THE PERFORMANCE OF DISCRIMINANT ANALYSIS FOR DIFFERENTIATING BETWEEN GENOTOXIC AND NONGENOTOXIC CARCINOGENSĆwiklinska-Jurkowska, Małgorzata; BURZYKOWSKI, Tomasz; Wietlicka-Piszcz, MagdalenaJournal ContributionA2
1172011A Bayesian model-averaging approach to the quantification of overlapping peptides in an MALDI-TOF mass spectrum.ZHU, Qi; KASIM, Adetayo; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
1182011OUTCOME OF TRIPLE PELVIC OSTEOTOMY IN DOGS IS ESTABLISHED WITHIN A MONTH AFTER THE SURGERYDegorska, Beata; BURZYKOWSKI, TomaszJournal ContributionA1
1192011Individual patient data meta-analysis of randomized trials evaluating IL-2 monotherapy as remission maintenance therapy in acute myeloid leukemiaBUYSE, Marc; Squifflet, Pierre; Lange, Beverly J.; Alonzo, Todd A.; Larson, Richard A.; Kolitz, Jonathan E.; George, Stephen L.; Bloomfield, Clara D.; Castaigne, Sylvie; Chevret, Sylvie; Blaise, Didier; Maraninchi, Dominique; Lucchesi, Kathryn J.; BURZYKOWSKI, TomaszJournal ContributionA1
1202011Evaluation of Laplace distribution-based ANOVA models applied to microarray data.VAN SANDEN, Suzy; BURZYKOWSKI, TomaszJournal ContributionA1
1212011Comparative assessment of trial-level surrogacy measures for candidate time-to-event surrogate endpoints in clinical trialsShi, Qian; Renfro, Lindsay A.; Bot, Brian M.; BURZYKOWSKI, Tomasz; BUYSE, Marc; Sargent, Daniel J.Journal ContributionA1
1222011A Bayesian Markov-Chain-Based Heteroscedastic Regression Model for the Analysis of O-18-Labeled Mass SpectraZHU, Qi; BURZYKOWSKI, TomaszJournal ContributionA1
1232011A Markov-Chain Model for the Analysis of High-Resolution Enzymatically O-18-Labeled Mass SpectraVALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
1242010Outcome of per protocol best-evidence based routine breast cancer care in a large regional hospital in Belgium: the importance of a prospective database in quality assurance.Van De Putte, G.; Vlasselaer, J.; TESHOME AYELE, Birhanu; GADDAH, Auguste; BURZYKOWSKI, Tomasz; Schobbens, J.C.; Benijts, G.; DE JONGE, EricJournal ContributionA2
1252010Simplified modeling strategies for surrogate validation with multivariate failure-time dataCORTINAS ABRAHANTES, Jose; BURZYKOWSKI, TomaszJournal ContributionA1
1262010A unified framework for the evaluation of surrogate endpoints in mental-health clinical trialsMOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; ALONSO ABAD, Ariel; ASSAM NKOUIBERT, Pryseley; Tilahun, Abel; BUYSE, MarcJournal ContributionA1
1272010Benefit of Adjuvant Chemotherapy for Resectable Gastric Cancer A Meta-analysisPAOLETTI, Xavier; Oba, Koji; BURZYKOWSKI, Tomasz; Michiels, Stefan; Ohashi, Yasuo; Pignon, Jean-Pierre; Rougier, Philippe; Sakamoto, Junichi; Sargent, Daniel; Sasako, Mitsuru; Van Cutsem, Eric; BUYSE, MarcJournal ContributionA1
1282010Missing data : discussion points from the PSI missing data expert groupBURZYKOWSKI, Tomasz; Carpenter, James; Coens, Corneel; Evans, Daniel; France, Lesley; Kenward, Mike; Lane, Peter; Matcham, James; Phillips, Alan; Roger, James; Sullivan, Brian; White, Ian; Yu, Ly-Mee; Morgan, DavidJournal ContributionA1
1292010Markov-Chain-Based Heteroscedastic Regression Model for the Analysis of High-Resolution Enzymatically O-18-Labeled Mass SpectraZHU, Qi; VALKENBORG, Dirk; BURZYKOWSKI, TomaszJournal ContributionA1
1302010The correlation structure of longitudinal measurements of vision in patients with macular degeneration.BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
1312009Statistical power calculations for clustered continuous dataGalecki, A.T.; Chen, S.; Faulkner, J.A.; Ashton-Miller, J.; BURZYKOWSKI, TomaszJournal ContributionA2
1322009The English Polish Dictionary of the Clinical Biostatistics TerminologyBURZYKOWSKI, Tomasz; Kawalec, E.; Kraszewska, E.; Kupsc, W.BookB1
1332009Multiple contrast test for detecting monotonic dose-response relationship and FDR-adjusted confidence intervals for selected parameters in a microarray SettingLIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Yekutieli, D.; De Bondt, A.; Göhlmann, WHH.; TALLOEN, Willem; BIJNENS, LucJournal ContributionA1
1342009A Comparison of Procedures for Controlling the False Discovery Rate in the Presence of Small Variance Genes: A Simulation StudyLIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; TALLOEN, Willem; BIJNENS, LucJournal ContributionA1
1352009Surrogate endpoints: wishful thinking or reality? (vol 17, pg 463-466, 2008)BURZYKOWSKI, TomaszJournal ContributionM
1362009A strategy for the prior processing of high-resolution mass spectral data obtained from high-dimensional combined fractional diagonal chromatographyVALKENBORG, Dirk; Thomas, Gregoire; Krols, Luc; Kas, Koen; BURZYKOWSKI, TomaszJournal ContributionA1
1372009Disease-free survival as a surrogate endpoint for overall survival in an adjuvant trial of curatively resected stomach cancer using individual patient data meta-analysisBURZYKOWSKI, Tomasz; Bang, Y.Journal ContributionM
1382009Surrogate endpoints for overall survival in locally advanced head and neck cancer: meta-analyses of individual patient dataMichiels, Stefan; Le Maitre, Aurelie; BUYSE, Marc; BURZYKOWSKI, Tomasz; Maillard, Emilie; Bogaerts, Jan; Vermorken, Jan B.; Budach, Wilfried; Pajak, Thomas F.; Ang, Kian K.; Bourhis, Jean; Pignon, Jean-PierreJournal ContributionA1
1392008Processing of high-resolution MALDI-TOF mass spectometry data by using an average isotopic distributionBURZYKOWSKI, Tomasz; VALKENBORG, DirkProceedings PaperC1
1402008Fitting conditional survival models to meta-analytic data by using a transformation toward mixed-effects modelsMASSONNET, Goele; JANSSEN, Paul; BURZYKOWSKI, TomaszJournal ContributionA1
1412008Information theory based marker evaluationLIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; AERTS, Marc; Göhlmann, H.W.H.; De Bondt, A.; Perera, T.; Geerts, T.; Van den Wyngaert, I.; BIJNENS, LucProceedings PaperC2
1422008An Investigation on Performance of Significance Analysis of Microarray (SAM) for the Comparisons of Several Treatments with one Control in the Presence of Small-variance GenesLIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Ion, R.; Goehlmann, H.W.H.; De Bondt, A.; Perera, T.; Geerts, T.; Van den Wyngaert, I.; BIJNENS, LucProceedings PaperC1
1432008Titrating Theileria parva: Single stocks against combination of stocksSpeybroeck, Niko; Marcotty, Tanguy; AERTS, Marc; Dolan, Tom; Williams, Brian; Lauer, Jeremy; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; Mulumba, Misheck; Berkvens, DirkJournal ContributionA1
1442008Performance of gene selection and classification methods in a microarray setting: A simulation studyVAN SANDEN, Suzy; LIN, Dan; BURZYKOWSKI, TomaszJournal ContributionA1
1452008Surrogate endpoints: wishful thinking or reality?BURZYKOWSKI, TomaszJournal ContributionA2
1462008Evaluation of tumor response, disease control, progression-free survival, and time to progression as potential surrogate end points in metastatic breast cancerBURZYKOWSKI, Tomasz; BUYSE, Marc; Piccart-Gebhart, Martine J.; Sledge, George; Carmichael, James; Lueck, Hans-Joachim; Mackey, John R.; Nabholtz, Jean-Marc; Paridaens, Robert; Biganzoli, Laura; Jassem, Jacek; Bontenbal, Marijke; Bonneterre, Jacques; Chan, Stephen; Basaran, Gul Atalay; Therasse, PatrickJournal ContributionA1
1472008The meta-analytic framework for the evaluation of surrogate endpoints in clinical trialsMOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; ALONSO ABAD, Ariel; ASSAM NKOUIBERT, Pryseley; TILAHUN ESHETE, Abel; BUYSE, MarcJournal ContributionA1
1482008Exploring and validating surrogate endpoints in colorectal cancerBURZYKOWSKI, Tomasz; BUYSE, Marc; Yothers, Greg; Sakamoto, Junichi; Sargent, DanJournal ContributionA1
1492008Assessment of the usefulness of the fenestration method in cases of disc extrusion in the cervical and thoraco-lumbar spine in chondrodystrophic dogsSterna, J.; BURZYKOWSKI, TomaszJournal ContributionA1
1502008A model-based method for the prediction of the isotopic distribution of peptidesVALKENBORG, Dirk; JANSEN, Ivy; BURZYKOWSKI, TomaszJournal ContributionA1
1512008Taxanes alone or in combination with anthracyclines as first-line therapy of patients with metastatic breast cancerPiccart-Gebhart, Martine J.; BURZYKOWSKI, Tomasz; BUYSE, Marc; Sledge, George; Carmichael, James; Luck, Hans-Joachim; Mackey, John R.; Nabholtz, Jean-Marc; Paridaens, Robert; Biganzoli, Laura; Jassem, Jacek; Bontenbal, Marijke; Bonneterre, Jacques; Chan, Stephen; Basaran, Gul Atalay; Therasse, PatrickJournal ContributionA1
1522008Individual- and trial-level surrogacy in colorectal cancerBUYSE, Marc; BURZYKOWSKI, Tomasz; Michiels, Stefan; Carroll, KevinJournal ContributionA1
1532008A Cross-Validation Study to Select a Classification Procedure for Clinical Diagnosis Based on Proteomic Mass SpectrometryVALKENBORG, Dirk; VAN SANDEN, Suzy; LIN, Dan; KASIM, Adetayo; JANSEN, Ivy; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; HALDERMANS, Philippe; ZHU, QiJournal ContributionA1
1542007Finding clusters of positive and negative coregulated genes in gene expression dataKOCH, Kerstin; Schonauer, Stefan; JANSEN, Ivy; VAN DEN BUSSCHE, Jan; BURZYKOWSKI, TomaszProceedings PaperC1
1552007Comparison of different estimation procedures for proportional hazards model with random effectsCORTINAS ABRAHANTES, Jose; LEGRAND, Catherine; BURZYKOWSKI, Tomasz; JANSSEN, Paul; Ducrocq, Vincent; DUCHATEAU, LucJournal ContributionA1
1562007Using a Poisson approximation to predict the isotopic distribution of sulphur-containing peptides in a peptide-centric proteomic approachVALKENBORG, Dirk; ASSAM NKOUIBERT, Pryseley; Thomas, Gregoire; Krols, Luc; Kas, Koen; BURZYKOWSKI, TomaszJournal ContributionA1
1572007Are prostate-specific antigen changes valid surrogates for survival in hormone-refractory prostate cancer? A meta-analysis is needed!Collette, Laurence; BUYSE, Marc; BURZYKOWSKI, TomaszJournal ContributionA1
1582007Reintroduction of oxaliplatin is associated with improved survival in advanced colorectal cancerde Gramont, Aimery; BUYSE, Marc; CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz; Quinaux, Emmanuel; Cervantes, Andres; Figer, Arie; Lledo, Gerard; Flesch, Michel; Mineur, Laurent; Carola, Elisabeth; Etienne, Pierre-Luc; Rivera, Fernando; Chirivella, Isabel; Perez-Staub, Nathalie; Louvet, Christophe; André, Thierry; Tabah-Fisch, Isabelle; Tournigand, ChristopheJournal ContributionA1
1592007The assessment of the usefulness of hemilaminectomy without fenestration in the treatment of thoracolumbar disc disease in chondrodystrophic dogsSterna, J.; BURZYKOWSKI, TomaszJournal ContributionA1
1602007Progression-free survival is a surrogate for survival in advanced colorectal cancerBUYSE, Marc; BURZYKOWSKI, Tomasz; Carroll, Kevin; Michiels, Stefan; Sargent, Daniel J.; Miller, Langdon L.; Elfring, Gary L.; Pignon, Jean-Pierre; Piedbois, PascalJournal ContributionA1
1612007Testing for trends in dose-response microarray experiments: A comparison of several testing procedures, multiplicity and resampling-based inferenceLIN, Dan; SHKEDY, Ziv; Yekutieli, Dani; BURZYKOWSKI, Tomasz; Goehlmann, Hinrich W. H.; De Bondt, An; Perera, Tim; Geerts, Tamara; BIJNENS, LucJournal ContributionA1
1622007Using linear mixed models for normalization of cDNA MicroarraysHALDERMANS, Philippe; SHKEDY, Ziv; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; AERTS, MarcJournal ContributionA1
1632006Fitting Frailty Models via Linear Mixed Models using Model TransformationMASSONNET, Goele; JANSSEN, Paul; BURZYKOWSKI, TomaszProceedings PaperC1
1642006Resampling Plans for Frailty ModelsMASSONNET, Goele; BURZYKOWSKI, Tomasz; JANSSEN, PaulJournal ContributionA1
1652006No association of leukemia inhibitory factor (LIF) DNA polymorphisms with multiple sclerosisVANDERLOCHT, Joris; BURZYKOWSKI, Tomasz; SOMERS, Veerle; STINISSEN, Piet; HELLINGS, NielsJournal ContributionA1
1662006Prostate-specific antigen (PSA) alone is not an appropriate surrogate marker of long-term therapeutic benefit in prostate cancer trialsCollette, L; BURZYKOWSKI, Tomasz; Schroder, FHJournal ContributionA1
1672006A modeling approach to the analysis of nerve regenerative experimentsVAN SANDEN, Suzy; Wouters, Luc; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Van Remoortere, Marie; MEERT, Theo; BIJNENS, LucJournal ContributionA1
1682006Surrogate threshold effect: An alternative measure for meta-analytic surrogate endpoint validationBURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
1692005Performance of classification methods in microarray settingVAN SANDEN, Suzy; LIN, Dan; BURZYKOWSKI, TomaszJournal ContributionA2
1702005New experimental techniques in genomics: challenges for data processing and analysisBURZYKOWSKI, TomaszProceedings PaperC2
1712005Hoge prevalentie voetinfecties in Europa: het Achilles projectBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Abeck, Dietrich; Haneke, EckartJournal ContributionA2
1722005The choice of unitsCORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz; MOLENBERGHS, GeertBook SectionB2
1732005Setting the sceneMOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, TomaszBook SectionB2
1742005The history of surrogate endpoint validationMOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, TomaszBook SectionB2
1752005The evaluation of surrogate endpointsBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; BUYSE, MarcBookB1
1762005Notation and motivating studiesMOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, TomaszBook SectionB2
1772005A meta-analytic validation framework for continuous outcomesMOLENBERGHS, Geert; BUYSE, Marc; BURZYKOWSKI, TomaszBook SectionB2
1782005Statistical interaction in the survival analysis of early breast cancer using registry data: Role of breast conserving surgery and radiotherapyVinh-Hung, V; BURZYKOWSKI, Tomasz; Van de Steene, J; Voordeckers, M; Lamote, J; Storme, GJournal ContributionA1
1792005A quantitative study of tumor response and progression-free survival as surrogate endpoints for overall survival in first-line treatment of metastatic breast cancerBURZYKOWSKI, Tomasz; Piccart, MJ; Sledge, G; Carmichael, J; Luck, HJ; Mackey, John R.; Nabholtz, JM; Paridaens, R; Biganzoli, L; Jassem, J; Blohmer, JU; Bontenbal, M; Bonneterre, J; Chan, S; Atalay, G.; Therasse, P; BUYSE, MarcJournal ContributionM
1802005Effects of taxanes alone or in combination with anthracyclines on tumor response, progression-free survival and overall survival in first-line chemotherapy of patients with metastatic breast cancer: an analysis of 4,256 patients randomized in 12 trialsPiccart, MJ; BURZYKOWSKI, Tomasz; Sledge, G; Luck, HJ; Mackey, John R.; Nabholtz, JM; Paridaens, R; Biganzoli, L; Jassem, J; Blohmer, JU; Bontenbal, M; Bonneterre, J; Chan, S; Atalay, G.; Carmichael, J; BUYSE, Marc; Therasse, PJournal ContributionM
1812005Risk factors for bovine herpesvirus-1 seropositivityBoelaert, Frank; Speybroeck, N.; de Kruif, A.; AERTS, Marc; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Berkvens, DirkJournal ContributionA1
1822005Design and analysis of drug combination experimentsSTRAETEMANS, Roel; O'BRIEN, Timothy; WOUTERS, Luc; Van Dun, J; Janicot, M; BIJNENS, Luc; BURZYKOWSKI, Tomasz; AERTS, MarcJournal ContributionA1
1832005Vegetables affect the expression of genes involved in anticarcinogenic processes in the colonic mucosa of C57BI/6 female micevan Breda, SGJ; van Agen, E; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; Kienhuis, AS; KLEINJANS, J.; VAN DELFT, JoostJournal ContributionA1
1842005Vegetables affect the expression of genes involved in carcinogenic and anticarcinogenic processes in the lungs of female C57BI/6 micevan Breda, SG; van Agen, E; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; KLEINJANS, J.; VAN DELFT, JoostJournal ContributionA1
1852005Is prostate-specific antigen a valid surrogate end point for survival in hormonally treated patients with metastatic prostate cancer? Joint research of the European Organisation for Research and Treatment of Cancer, the Limburgs Universitair Centrum, and AstraZeneca PharmaceuticalsCollette, L; BURZYKOWSKI, Tomasz; Carroll, KJ; Newling, D; Morris, T; Schroder, FHJournal ContributionA1
1862005A version of the EM algorithm for proportional hazard model with random effectsCORTINAS ABRAHANTES, Jose; BURZYKOWSKI, TomaszJournal ContributionA1
1872005Joint modelling of repeated measurements and event time: Application to performance traits and survival of lambs bred in sub-humid tropicsNGUTI, Rosemary; BURZYKOWSKI, Tomasz; Rowlands, J; RENARD, Didier; JANSSEN, PaulJournal ContributionA1
1882005Progression-free survival (PFS) as a surrogate for overall survival (OS) in patients with advanced colorectal cancer: An analysis of 3159 patients randomized in 11 trials.BUYSE, Marc; BURZYKOWSKI, Tomasz; Carroll, K; Michiels, Stefan; Pignon, JP; Piedbois, PJournal ContributionM
1892005The effects of foot disease on quality of life: results of the Achilles ProjectKatsambas, A.; Abeck, D.; Haneke, E.; van der Kerkhof, P.; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Marynissen, GreetJournal ContributionA1
1902004Predicted and observed thyroid cancer incidence in Poland after year 1986BURZYKOWSKI, Tomasz; Chmielarczyk, WiktorJournal ContributionA3
1912004Prentice's approach and the meta-analytic paradigm: a reflection on the role of statistics in the evaluation of surrogate endpointsALONSO ABAD, Ariel; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; RENARD, Didier; GEYS, Helena; SHKEDY, Ziv; TIBALDI, Fabian; CORTINAS ABRAHANTES, Jose; BUYSE, MarcJournal ContributionA1
1922004Choice of units of analysis and modeling strategies in multilevel hierarchical modelsCORTINAS ABRAHANTES, Jose; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; SHKEDY, Ziv; ALONSO ABAD, Ariel; RENARD, DidierJournal ContributionA1
1932004Is prostate-specific antigen a surrogate for survival in advanced prostate cancer?Collette, L; BURZYKOWSKI, Tomasz; Carroll, K; Newling, D; Morris, T; Schroder, FJournal ContributionM
1942004A perspective on surrogate endpoints in controlled clinical trialsMOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; ALONSO ABAD, Ariel; BUYSE, MarcJournal ContributionA1
1952004Efficacy of oral adjuvant therapy after resection of colorectal cancer: 5-year results from three randomized trialsSakamoto, J.; Ohashi, Y.; Hamada, C.; BUYSE, Marc; BURZYKOWSKI, Tomasz; Piedbois, P.Journal ContributionA1
1962004The validation of surrogate endpoints by using data from randomized clinical trials: a case-study in advanced colorectal cancerBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; BUYSE, MarcJournal ContributionA1
1972004Axillary sentinel node and tumour-related factors associated with non-sentinel node involvement in breast cancerCserni, Gabor; BURZYKOWSKI, Tomasz; Vinh-Hung, Vincent; Kocsis, Lajos; Boross, Gabor; Sinko, Maria; Tarjan, Miklos; Bori, Rita; Rajtar, Maria; Tekle, Eliza; Maraz, Robert; Baltas, Bela; Svebis, MihalyJournal ContributionA1
1982004Pseudo-likelihood estimation for a marginal multivariate survival modelTIBALDI, Fabian; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; GEYS, HelenaJournal ContributionA1
1992003A version of the EM algorithm for proportional hazards models with random effectsCORTINAS ABRAHANTES, Jose; BURZYKOWSKI, TomaszProceedings PaperC2
2002003A hierarchical Bayesian approach for the evaluation of surrogate endpoints in multiple randomized clinical trialsSHKEDY, Ziv; TORRES BARBOSA, Franz; BURZYKOWSKI, Tomasz; MOLENBERGHS, GeertProceedings PaperC2
2012003Statistical analysis of data from single molecule experimentBURZYKOWSKI, Tomasz; SZUBIAKOWSKI, Jacek; Ryden, TobiasProceedings PaperC1
2022003Validation of biomarkers as surrogates for clinical endpointsBUYSE, Marc; VANGENEUGDEN, Tony; BIJNENS, Luc; RENARD, Didier; BURZYKOWSKI, Tomasz; GEYS, Helena; MOLENBERGHS, GeertBook SectionB3
2032003Multivariate analysis of risk factors for development of duodenal ulcer in Helicobacter pylori-infected patientsRegula, J.; Hennig, E.; BURZYKOWSKI, Tomasz; Orlowska, J.; Przytulski, K.; Polkowski, M.; Dziurkowska-Marek, A.; Marek, T.; Nowak, A.; Butruk, E.; Ostrowski, J.Journal ContributionA1
2042003Analysis of photon count data from single-molecule fluorescence experimentsBURZYKOWSKI, Tomasz; SZUBIAKOWSKI, Jacek; Ryden, T.Journal ContributionA1
2052003Simplified hierarchical linear models for the evaluation of surrogate endpointsTIBALDI, Fabian; CORTINAS ABRAHANTES, Jose; MOLENBERGHS, Geert; RENARD, Didier; BURZYKOWSKI, Tomasz; BUYSE, Marc; Parmar, Mahesh; Stijnen, Theo; Wolfinger, RussJournal ContributionA1
2062003Design-based analysis of surveys: a bovine herpesvirus 1 case studySpeybroeck, N.; Boelaert, Frank; RENARD, Didier; BURZYKOWSKI, Tomasz; Mintiens, Koen; MOLENBERGHS, Geert; Berkvens, DirkJournal ContributionA1
2072003High prevalence of foot diseases in Europe: results of the Achilles projectBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Abeck, Dietrich; Haneke, Eckart; Hay, Roderick; Katsambas, Andreas; Roseeuw, Diane; van de Kerkhof, Peter; van Aelst, Roeland; Marynissen, GreetJournal ContributionA1
2082003Using the 'expected' survival to explain differences between the results of randomized trials: a case in advanced ovarian cancerBUYSE, Marc; BURZYKOWSKI, Tomasz; Parmar, Mahesh; Torri, Valter; Omura, George; Colombo, Nicoletta; Williams, Chris; Conte, Pierfranco; Vermorken, JanJournal ContributionA1
2092003Validation of a longitudinally measured surrogate for a time-to-event endpointRENARD, Didier; GEYS, Helena; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; BUYSE, Marc; VANGENEUGDEN, Tony; BIJNENS, LucJournal ContributionA1
2102003Functional form of the effect of the numbers of axillary nodes on survival in early breast cancerVinh-Hung, V.; BURZYKOWSKI, Tomasz; Cserni, G.; Voordeckers, M.; Van de Steene, J.; Storme, G.Journal ContributionA1
2112003Effect of the number of uninvolved nodes on survival in early breast cancerVinh-Hung, Vincent; Cserni, Gabor; BURZYKOWSKI, Tomasz; Van de Steene, Jan; Voordeckers, Mia; Storme, GuyJournal ContributionA1
2122002Is there a minimum number of lymph nodes that should be histologically assessed for a reliable nodal staging of T3N0M0 colorectal carcinomas?Cserni, G.; Vinh-Hung, V.; BURZYKOWSKI, TomaszJournal ContributionA1
2132002Post-surgery radiation in early breast cancer: survival analysis of registry dataVinh-Hung, Vincent; BURZYKOWSKI, Tomasz; Van de Steene, Jan; Storme, Guy; Soete, GuyJournal ContributionA1
2142002Methodology for the validation of surrogate endpoints in multiple randomized experimentsBURZYKOWSKI, TomaszProceedings PaperC1
2152002A version of the EM algorithm for proportional hazards models with random effectsCORTINAS ABRAHANTES, Jose; BURZYKOWSKI, TomaszJournal ContributionA2
2162002Bayesian models in the evaluation of surrogate endpointsTORRES BARBOSA, Franz; TIBALDI, Fabian; CORTINAS ABRAHANTES, Jose; BURZYKOWSKI, Tomasz; GEYS, Helena; Allende, S.; MOLENBERGHS, GeertProceedings PaperC2
2172002Statistical challenges in the evaluation of surrogate endpoints in randomized trialsMOLENBERGHS, Geert; BUYSE, Marc; GEYS, Helena; RENARD, Didier; BURZYKOWSKI, Tomasz; ALONSO ABAD, ArielJournal ContributionA1
2182002Challenges in the methodology for the validation of surrogate endpoints in randomized trialsMOLENBERGHS, Geert; BUYSE, Marc; GEYS, Helena; RENARD, Didier; BURZYKOWSKI, TomaszProceedings PaperC2
2192002Validation of surrogate endpoints in multiple randomized clinical trials with discrete outcomesRENARD, Didier; GEYS, Helena; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; BUYSE, MarcJournal ContributionA1
2202001Validation of surrogate endpoints from multiple randomized clinical trials with a failure-time true endpointBURZYKOWSKI, TomaszTheses and DissertationsT1
2212001Strong association between p53 protein accumulation, serum antibodies and gene mutation in non-small cell lung cancerNiklinska, W.; BURZYKOWSKI, Tomasz; Chyczewski, L.; Laudanski, J.; Niklinski, J.Journal ContributionA1
2222001Methodology for the validation of surrogate endpoints in multiple randomized experimentsMOLENBERGHS, Geert; ALONSO ABAD, Ariel; BURZYKOWSKI, Tomasz; CORTINAS ABRAHANTES, Jose; GEYS, Helena; RENARD, Didier; SHKEDY, Ziv; TIBALDI, Fabian; BUYSE, MarcProceedings PaperC2
2232001Methodology of the validation of surrogate endpoints in multiple randomized experimentsMOLENBERGHS, Geert; ALONSO ABAD, Ariel; BURZYKOWSKI, Tomasz; CORTINAS ABRAHANTES, Jose; GEYS, Helena; RENARD, Didier; SHKEDY, Ziv; TIBALDI, Fabian; BUYSE, MarcProceedings PaperC2
2242001Expression of vascular endothelial growth factor (VEGF) in non-small cell lung cancer (NSCLC): association with p53 gene mutation and prognosisNiklinska, W.; BURZYKOWSKI, Tomasz; Chyczewski, L.; Niklinski, JacekJournal ContributionA1
2252001Validation of surrogate endpoints in multiple randomized clinical trials with failure-time endpointsBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; BUYSE, Marc; GEYS, Helena; RENARD, DidierJournal ContributionA1
2262001Re: A model to select chemotherapy regimens for phase III trials for extensive-stage small-cell lung cancerBUYSE, Marc; Thirion, Pierre; Carlson, Robert; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Piedbois, PascalJournal ContributionA1
2272001Prognostic significance of p53 and bcl-2 abnormalities in operable non-small cell lung cancerLaudanski, J.; Niklinska, W.; BURZYKOWSKI, Tomasz; Chyczewski, L.; Niklinski, J.Journal ContributionA1
2282000P53 gene mutation and protein expression in operable non-small cell lung cancer in PolandNiklinska, W.; BURZYKOWSKI, Tomasz; Chyczewski, L.; Rusin, M. R.; Furman, M.; Laudanski, J.; Chyczewska, E.; Sulik, M.; Niklinski, JacekJournal ContributionA1
2292000Validation of surrogate endpoints in multiple randomized clinical trials with failure-time endpointsBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; BUYSE, Marc; GEYS, Helena; RENARD, DidierProceedings PaperC1
2302000Relation between tumour response to first-line chemotherapy and survival in advanced colorectal cancer: a meta-analysisBUYSE, Marc; Thirion, Pierre; Carlson, Robert W.; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Piedbois, PascalJournal ContributionA1
2312000Statistical validation of surrogate endpoints: problems and proposalsBUYSE, Marc; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; RENARD, Didier; GEYS, HelenaJournal ContributionA1
2322000Corrigendum to "The validation of surrogate endpoints in randomized experiments"BUYSE, Marc; MOLENBERGHS, Geert; BURZYKOWSKI, TomaszJournal ContributionM
2332000The validation of surrogate endpoints in meta-analyses of randomized experimentsBUYSE, Marc; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; RENARD, Didier; GEYS, HelenaJournal ContributionA1
2341999The effect of long-term water storage on the tensile strength of orthodontic brackets bonded with resin-reinforced glass-ionomer cementsCzochrowska, E.; BURZYKOWSKI, Tomasz; Buyukyilmaz, T.; Ogaard, B.Journal Contribution
2351999Low-dose Glucose-Insulin-Potassium is ineffective in acute myocardial infarction: results of a randomized multicenter Pol-GIK trialCeremuzynski, L.; Budaj, A.; Czepiel, A.; BURZYKOWSKI, Tomasz; Achremczyk, P.; Smielak-Korombel, W.; Maciejewicz, J.; Dziubinska, J.; Nartowicz, E.; Kawka-Urbanek, T.; Piotrowski, W.; Hanzlik, J.; Cieslinski, A.; Kawecka-Jaszcz, K.; Gessek, J.; Wrabec, K.Journal Contribution
2361999The validation of surrogate endpoints in meta-analyses of randomized experimentsBUYSE, Marc; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; RENARD, Didier; GEYS, HelenaProceedings Paper
2371999Analysis of incomplete public health dataMOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; MICHIELS, Bart; Kenward, Michael G.Journal Contribution
2381999Missing Data in the Health Interview Survey 1997 in BelgiumBURZYKOWSKI, Tomasz; MOLENBERGHS, Geert; Tafforeau, Jean; Van Oyen, Herman; Demarest, S.; Bellamammer, L.Journal Contribution
2391998Quasi-optimal selection of stratification variables in representative studies based on an example in agricultureBURZYKOWSKI, TomaszJournal Contribution
2401998Prognostic value of serum p53 antibodies in patients with resected non-small lung cancerLaudanski, J.; BURZYKOWSKI, Tomasz; Niklinska, W.; Chyczewski, L.; Furman, M.; Niklinski, JacekJournal Contribution
2411998Preoperative CYFRA 21-1 level as a prognostic indicator in resected nonsmall cell lung cancerNiklinski, Jacek; BURZYKOWSKI, Tomasz; Niklinska, W.; Laudanski, J.; Chyczewski, L.; Rapellino, M.; Furman, M.Journal Contribution
2421997Changes of thyroid cancer incidence in 1986-1994 in PolandChmielarczyk, Wiktor; BURZYKOWSKI, Tomasz; Wronkowski, Zbigniew; Zwierko, MariaJournal Contribution
2431996Some issues related to organization of clinical trialsBURZYKOWSKI, TomaszBook Section
2441996Preoperative CYFRA 21-1 level as a prognostic factor in resected primary squamous cell lung cancerNiklinski, Jacek; Furman, M.; BURZYKOWSKI, Tomasz; Chyczewski, L.; Laudanski, J.; Chyczewska, E.; Rapellino, M.Journal Contribution
2451996Basic problems and methods of organization of clinical trialsBURZYKOWSKI, TomaszJournal Contribution
2461994Prognostic value of the Duke, Astler-Coller and Jass classification and the type of CEA localization in rectal carcinoma - a multivariate analysisNasierowska-Guttmejer, Anna; Roszkowska-Purska, Katarzyna; Maryniak, R.; BURZYKOWSKI, Tomasz; Nowacki, M.Journal Contribution
2471994Meta-analysis: A useful tool in scientific work of an oncologistBURZYKOWSKI, Tomasz; Ruka, W.Journal Contribution
2481993Prognostic factors in radiotherapy of oropharyngeal cancerSzutkowski, M.; Wasilewski, M.; BURZYKOWSKI, TomaszJournal Contribution