|
| | Issue Date | Title | Contributor(s) | Type | Cat. |
| 1 | 2024 | Testing for in vitro genetic toxicity in high dimensional nanomaterial dose-response experiments | AZIZAH, Rahma; Verheyen, Geert R.; SHKEDY, Ziv; Van Miert, Sabine | Journal Contribution | A1 |
| 2 | 2023 | Sustainable Statistical Capacity-Building for Africa: The Biostatistics Case | REDDY, Tarylee; NSUBUGA, Rebecca; Chirwa, Tobias; SHKEDY, Ziv; Mwangi, Ann; AWOKE AYELE, Tadesse; DUCHATEAU, Luc; JANSSEN, Paul | Journal Contribution | A1 |
| 3 | 2023 | Bayesian model averaging in longitudinal studies using Bayesian variable selection methods | YIMER, Belay Birlie; OTAVA, Martin; Degefa, Teshome; Yewhalaw, Delenasaw; SHKEDY, Ziv | Journal Contribution | A1 |
| 4 | 2023 | Development of Microbiome Biomarkers in Intervention Studies | OWOKOTOMO, Olajumoke Evangelina; SENGUPTA, Rudradev; SHKEDY, Ziv | Journal Contribution | A1 |
| 5 | 2023 | Modeling the positive testing rate of COVID-19 in South Africa using a semi-parametric smoother for binomial data | OWOKOTOMO, Olajumoke Evangelina; Manda, Samuel; CLEAESEN, Jurgen; KASIM, Adetayo; SENGUPTA, Rudradev; Shome, Rahul; Subhra Paria, Soumya; REDDY, Tarylee; SHKEDY, Ziv | Journal Contribution | A1 |
| 6 | 2022 | Dose-response analysis of nanomaterial toxicity | AZIZAH, Rahma; Verheyen, G.; Van Miert, S.; SHKEDY, Ziv | Journal Contribution | M |
| 7 | 2022 | Modelling trends of CD4 counts for patients on antiretroviral therapy (ART): a comprehensive health care clinic in Nairobi, Kenya | MUGO, Caroline; SHKEDY, Ziv; Mwalili, Samuel; Awoke, Tadesse; BRAEKERS, Roel; Wandede, Dolphine; Mwachari, Christina | Journal Contribution | A1 |
| 8 | 2021 | Global prevalence of Mycobacterium bovis infections among human tuberculosis cases: Systematic review and meta-analysis | Taye, H; Alemu, K; Mihret, A; WOOD, James; SHKEDY, Ziv; Berg , S; Aseffa, A | Journal Contribution | A1 |
| 9 | 2021 | Epidemiology of Mycobacterium tuberculosis lineages and strain clustering within urban and peri-urban settings in Ethiopia | Taye, H; Alemu, K; Mihret, A; Ayalew, S; Hailu, E; WOOD, James; SHKEDY, Ziv; Berg , S; Aseffa, A; Uddin, Md Jamal | Journal Contribution | A1 |
| 10 | 2021 | Factors associated with localization of tuberculosis disease among patients in a high burden country: A health facility-based comparative study in Ethiopia | Taye, H; Alemu, K; Mihret, A; WOOD, James; SHKEDY, Ziv; Berg , S; Aseffa, A | Journal Contribution | A1 |
| 11 | 2021 | A Roadmap for Building Data Science Capacity for Health Discovery and Innovation in Africa | Beyene, Joseph; Harrar, Solomon W.; Altaye, Mekibib; Astatkie, Tessema; Awoke, Tadesse; SHKEDY, Ziv; Mersha, Tesfaye B. | Journal Contribution | A1 |
| 12 | 2021 | Short-term real-time prediction of total number of reported COVID-19 cases and deaths in South Africa: a data driven approach | REDDY, Tarylee; SHKEDY, Ziv; Janse van Rensburg, Charl; Mwambi, Henry; Debba, Pravesh; Zuma, Khangelani; Manda, Samuel | Journal Contribution | A1 |
| 13 | 2021 | Informal mhealth at scale in Africa: Opportunities and challenges | Hampshire, Kate; Mwase-Vuma, Tawonga; Alemu, Kassahun; Abane, Albert; Munthali, Alister; Awoke, Tadesse; Mariwah, Simon; Chamdimba, Elita; Owusu, Samuel Asiedu; Robson, Elsbeth; Castelli, Michele; SHKEDY, Ziv; Shawa, Nicholas; Abel, Jane; KASIM, Adetayo | Journal Contribution | A1 |
| 14 | 2021 | Bayesian inference for generalized linear mixed models: A comparison of different statstical software procedures | YIMER, Belay Birlie; SHKEDY, Ziv | Journal Contribution | A1 |
| 15 | 2021 | Evaluation of surrogate endpoints | MOLENBERGHS, Geert; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; BUYSE, Marc; ALONSO ABAD, Ariel; VAN DER ELST, Wim | Book Section | B2 |
| 16 | 2021 | Identification of Monotonic Trends in the Dose-response Relationship of Nanomaterial Toxicity Data using the R package NMTox | AZIZAH, Rahma; Verheyen, G.; Van Miert, S.; SHKEDY, Ziv | Journal Contribution | M |
| 17 | 2021 | Exploring the Microbiome Analysis and Visualization Landscape | PEETERS, Jannes; THAS, Olivier; SHKEDY, Ziv; KODALCI, Leyla; MUSISI, Connie; OWOKOTOMO, Olajumoke Evangelina; DYCZKO, Aleksandra; HAMAD, Ibrahim; VANGRONSVELD, Jaco; KLEINEWIETFELD, Markus; THIJS, Sofie; AERTS, Jan | Journal Contribution | A1 |
| 18 | 2020 | Social contact data for Belgium (2006) | HENS, Niel; Goeyvaerts, Nele; AERTS, Marc; SHKEDY, Ziv; Van Damme, Pierre; Beutels , Philippe | Dataset | DS |
| 19 | 2020 | Latent Class Evaluation in Educational Trials: What Percentage of Children Benefits from an Intervention? | Uwimpuhwe, Germaine; Singh, Akansha; Higgins, Steve; Coux, Mickael; Xiao, ZhiMin; SHKEDY, Ziv; KASIM, Adetayo | Journal Contribution | A1 |
| 20 | 2020 | Meta-analytic approach to evaluation of surrogate endpoints | BURZYKOWSKI, Tomasz; BUYSE, Marc; MOLENBERGHS, Geert; ALONSO ABAD, Ariel; VAN DER ELST, Wim; SHKEDY, Ziv | Book Section | B2 |
| 21 | 2020 | High dimensional surrogacy: computational aspects of an upscaled analysis | SENGUPTA, Rudradev; PERUALILA, Nolen Joy; SHKEDY, Ziv; Biecek, Przemyslaw; MOLENBERGHS, Geert; BIJNENS, Luc | Journal Contribution | A1 |
| 22 | 2019 | Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen | Menden, Michael P.; Wang, Dennis; Mason, Mike J.; Szalai, Bence; Bulusu, Krishna C.; Guan, Yuanfang; Yu, Thomas; Kang, Jaewoo; Jeon, Minji; Wolfinger, Russ; Nguyen, Tin; Zaslavskiy, Mikhail; Jang, In Sock; Ghazoui, Zara; Ahsen, Mehmet Eren; Vogel, Robert; Neto, Elias Chaibub; Norman, Thea; Tang, Eric K. Y.; Garnett, Mathew J.; Di Veroli, Giovanni Y.; Fawell, Stephen; Stolovitzky, Gustavo; Guinney, Justin; Dry, Jonathan R.; Saez-Rodriguez, Julio; Abante, Jordi; Abecassis, Barbara Schmitz; Aben, Nanne; Aghamirzaie, Delasa; Aittokallio, Tero; Akhtari, Farida S.; Al-lazikani, Bissan; Alam, Tanvir; Allam, Amin; Allen, Chad; de Almeida, Mariana Pelicano; Altarawy, Doaa; Alves, Vinicius; Amadoz, Alicia; Anchang, Benedict; Antolin, Albert A.; Ash, Jeremy R.; Romeo Aznar, Victoria; Ba-alawi, Wail; Bagheri, Moeen; Bajic, Vladimir; Ball, Gordon; Ballester, Pedro J.; Baptista, Delora; Bare, Christopher; Bateson, Mathilde; Bender, Andreas; Bertrand, Denis; Wijayawardena, Bhagya; Boroevich, Keith A.; Bosdriesz, Evert; Bougouffa, Salim; Bounova, Gergana; Brouwer, Thomas; Bryant, Barbara; Calaza, Manuel; Calderone, Alberto; Calza, Stefano; Capuzzi, Stephen; Carbonell-Caballero, Jose; Carlin, Daniel; Carter, Hannah; Castagnoli, Luisa; Celebi, Remzi; Cesareni, Gianni; Chang, Hyeokyoon; Chen, Guocai; Chen, Haoran; Chen, Huiyuan; Cheng, Lijun; Chernomoretz, Ariel; Chicco, Davide; Cho, Kwang-Hyun; Cho, Sunghwan; Choi, Daeseon; Choi, Jaejoon; Choi, Kwanghun; Choi, Minsoo; De Cock, Martine; Coker, Elizabeth; Cortes-Ciriano, Isidro; Cserzo, Miklos; Cubuk, Cankut; Curtis, Christina; Van Daele, Dries; Dang, Cuong C.; Dijkstra, Tjeerd; Dopazo, Joaquin; Draghici, Sorin; Drosou, Anastasios; Dumontier, Michel; Ehrhart, Friederike; Eid, Fatma-Elzahraa; ElHefnawi, Mahmoud; Elmarakeby, Haitham; van Engelen, Bo; Engin, Hatice Billur; de Esch, Iwan; EVELO, Chris; Falcao, Andre O.; Farag, Sherif; Fernandez-Lozano, Carlos; Fisch, Kathleen; Flobak, Asmund; Fornari, Chiara; Foroushani, Amir B. K.; Fotso, Donatien Chedom; Fourches, Denis; Friend, Stephen; Frigessi, Arnoldo; Gao, Feng; Gao, Xiaoting; Gerold, Jeffrey M.; Gestraud, Pierre; Ghosh, Samik; Gillberg, Jussi; Godoy-Lorite, Antonia; Godynyuk, Lizzy; Godzik, Adam; Goldenberg, Anna; Gomez-Cabrero, David; Gonen, Mehmet; de Graaf, Chris; Gray, Harry; Grechkin, Maxim; Guimera, Roger; Guney, Emre; Haibe-Kains, Benjamin; Han, Younghyun; Hase, Takeshi; He, Di; He, Liye; Heath, Lenwood S.; Hellton, Kristoffer H.; Helmer-Citterich, Manuela; Hidalgo, Marta R.; Hidru, Daniel; Hill, Steven M.; Hochreiter, Sepp; Hong, Seungpyo; Hovig, Eivind; Hsueh, Ya-Chih; Hu, Zhiyuan; Huang, Justin K.; Huang, R. Stephanie; Hunyady, Laszlo; Hwang, Jinseub; Hwang, Tae Hyun; Hwang, Woochang; Hwang, Yongdeuk; Isayev, Olexandr; Walk, Oliver Bear Don't; Jack, John; Jahandideh, Samad; Ji, Jiadong; Jo, Yousang; Kamola, Piotr J.; Kanev, Georgi K.; Karacosta, Loukia; Karimi, Mostafa; Kaski, Samuel; Kazanov, Marat; Khamis, Abdullah M.; Khan, Suleiman Ali; Kiani, Narsis A.; Kim, Allen; Kim, Jinhan; Kim, Juntae; Kim, Kiseong; Kim, Kyung; Kim, Sunkyu; Kim, Yongsoo; Kim, Yunseong; Kirk, Paul D. W.; Kitano, Hiroaki; Klambauer, Gunter; Knowles, David; Ko, Melissa; Kohn-Luque, Alvaro; Kooistra, Albert J.; Kuenemann, Melaine A.; Kuiper, Martin; Kurz, Christoph; Kwon, Mijin; van Laarhoven, Twan; Laegreid, Astrid; Lederer, Simone; Lee, Heewon; Lee, Jeon; Lee, Yun Woo; Leppaho, Eemeli; Lewis, Richard; Li, Jing; Li, Lang; Liley, James; Lim, Weng Khong; Lin, Chieh; Liu, Yiyi; Lopez, Yosvany; Low, Joshua; Lysenko, Artem; Machado, Daniel; Madhukar, Neel; De Maeyer, Dries; Malpartida, Ana Belen; Mamitsuka, Hiroshi; Marabita, Francesco; Marchal, Kathleen; Marttinen, Pekka; Mason, Daniel; Mazaheri, Alireza; Mehmood, Arfa; Mehreen, Ali; Michaut, Magali; Miller, Ryan A.; Mitsopoulos, Costas; Modos, Dezso; VAN MOERBEKE, Marijke; Moo, Keagan; Motsinger-Reif, Alison; Movva, Rajiv; Muraru, Sebastian; Muratov, Eugene; Mushthofa, Mushthofa; Nagarajan, Niranjan; Nakken, Sigve; Nath, Aritro; Neuvial, Pierre; Newton, Richard; Ning, Zheng; De Niz, Carlos; Oliva, Baldo; Olsen, Catharina; Palmeri, Antonio; Panesar, Bhawan; Papadopoulos, Stavros; Park, Jaesub; Park, Seonyeong; Park, Sungjoon; Pawitan, Yudi; Peluso, Daniele; Pendyala, Sriram; Peng, Jian; Perfetto, Livia; Pirro, Stefano; Plevritis, Sylvia; Politi, Regina; Poon, Hoifung; Porta, Eduard; Prellner, Isak; Preuer, Kristina; Angel Pujana, Miguel; Ramnarine, Ricardo; Reid, John E.; Reyal, Fabien; Richardson, Sylvia; Ricketts, Camir; Rieswijk, Linda; Rocha, Miguel; Rodriguez-Gonzalvez, Carmen; Roell, Kyle; Rotroff, Daniel; de Ruiter, Julian R.; Rukawa, Ploy; Sadacca, Benjamin; Safikhani, Zhaleh; Safitri, Fita; Sales-Pardo, Marta; Sauer, Sebastian; Schlichting, Moritz; Seoane, Jose A.; Serra, Jordi; Shang, Ming-Mei; Sharma, Alok; Sharma, Hari; Shen, Yang; Shiga, Motoki; Shin, Moonshik; SHKEDY, Ziv; Shopsowitz, Kevin; Sinai, Sam; Skola, Dylan; Smirnov, Petr; Soerensen, Izel Fourie; Soerensen, Peter; Song, Je-Hoon; Song, Sang Ok; Soufan, Othman; Spitzmueller, Andreas; Steipe, Boris; Suphavilai, Chayaporn; Tamayo, Sergio Pulido; Tamborero, David; Tang, Jing; Tanoli, Zia-ur-Rehman; Tarres-Deulofeu, Marc; Tegner, Jesper; Thommesen, Liv; Tonekaboni, Seyed Ali Madani; Tran, Hong; DE TROYER, Ewoud; Truong, Amy; Tsunoda, Tatsuhiko; Turu, Gabor; Tzeng, Guang-Yo; Verbeke, Lieven; Videla, Santiago; Vis, Daniel; Voronkov, Andrey; Votis, Konstantinos; Wang, Ashley; Wang, Hong-Qiang Horace; Wang, Po-Wei; Wang, Sheng; WANG, Weixin; Wang, Xiaochen; Wang, Xin; Wennerberg, Krister; Wernisch, Lorenz; Wessels, Lodewyk; van Westen, Gerard J. P.; Westerman, Bart A.; White, Simon Richard; Willighagen, Egon; Wurdinger, Tom; Xie, Lei; Xie, Shuilian; Xu, Hua; Yadav, Bhagwan; Yau, Christopher; Yeerna, Huwate; Yin, Jia Wei; Yu, Michael; Yu, MinHwan; Yun, So Jeong; Zakharov, Alexey; Zamichos, Alexandros; Zanin, Massimiliano; Zeng, Li; Zenil, Hector; Zhang, Frederick; Zhang, Pengyue; Zhang, Wei; Zhao, Hongyu; Zhao, Lan; Zheng, Wenjin; Zoufir, Azedine; Zucknick, Manuela | Journal Contribution | A1 |
| 23 | 2019 | Model-based prediction of CD4 cells counts in HIV-infected adults on antiretroviral therapy in Northwest Ethiopia: A flexible mixed effects approach | Ayele, Tadesse Awoke; Worku, Alemayehu; Kebede, Yigzaw; Zuma, Khangelani; KASIM, Adetayo; SHKEDY, Ziv | Journal Contribution | A1 |
| 24 | 2019 | A multivariate linear model for investigating the association between gene-module co-expression and a continuous covariate | PADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; Salo, Perttu; Perola, Markus; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 25 | 2019 | Correlations between the metabolic profile and 18F-FDG-Positron Emission Tomography-Computed Tomography parameters reveal the complexity of the metabolic reprogramming within lung cancer patients | VANHOVE, Karolien; THOMEER, Michiel; DERVEAUX, Elien; SHKEDY, Ziv; OWOKOTOMO, Olajumoke Evangelina; ADRIAENSENS, Peter; MESOTTEN, Liesbet | Journal Contribution | A1 |
| 26 | 2019 | Development of a prognostic signature for non-small cell lung cancer | VANHOVE, Karolien; DERVEAUX, Elien; OWOKOTOMO, Olajumoke Evangelina; MESOTTEN, Liesbet; SHKEDY, Ziv; ADRIAENSENS, Peter; THOMEER, Michiel | Conference Material | C2 |
| 27 | 2018 | A Bayesian Hierarchical Model Approach to Summarize Expression values of Exon and Affymetrix arrays | VAN MOERBEKE, Marijke; KASIM, Adetayo; SHKEDY, Ziv | Working Paper | R2 |
| 28 | 2018 | The Potential of Exon-Exon Splice Junctions | VAN MOERBEKE, Marijke; KASIM, Adetayo; SHKEDY, Ziv | Working Paper | R2 |
| 29 | 2018 | A Closer Look on Spatiotemporal Variations of Dissolved Oxygen in Waste Stabilization Ponds Using Mixed Models | Ho, Long; Duy Tan Pham; Van Echelpoel, Wout; MUCHENE, Leacky; SHKEDY, Ziv; Alvarado, Andres; Espinoza-Palacios, Juan; Arevalo-Durazno, Maria; THAS, Olivier; Goethals, Peter | Journal Contribution | A1 |
| 30 | 2018 | The Usage of Exon-Exon Splice Junctions for the Detection of Alternative Splicing using the REIDS model | VAN MOERBEKE, Marijke; KASIM, Adetayo; SHKEDY, Ziv | Journal Contribution | A1 |
| 31 | 2018 | Diffusion kurtosis imaging allows the early detection and longitudinal follow-up of amyloid-beta-induced pathology | Praet, Jelle; Manyakov, Nikolay V.; MUCHENE, Leacky; Mai, Zhenhua; Terzopoulos, Vasilis; de Backer, Steve; Torremans, An; Guns, Pieter-Jan; Van De Casteele, Tom; Bottelbergs, Astrid; Van Broeck, Bianca; Sijbers, Jan; Smeets, Dirk; SHKEDY, Ziv; BIJNENS, Luc; Pemberton, Darrel J.; Schmidt, Mark E.; Van der Linden, Annemie; Verhoye, Marleen | Journal Contribution | A1 |
| 32 | 2018 | Differential effects of two therapeutic cancer vaccines on short- and long-term survival populations among patients with advanced lung cancer | SANCHEZ, Lizet; MUCHENE, Leacky; Lorenzo-Luaces, Patricia; Viada, Carmen; Rodriguez, Pedro C.; Alfonso, Sailyn; Crombet, Tania; Neninger, Elia; SHKEDY, Ziv; Lage, Agustin | Journal Contribution | A1 |
| 33 | 2018 | The plasma glutamate concentration as a complementary tool to differentiate benign PET-positive lung lesions from lung cancer | VANHOVE, Karolien; GIESEN, Pieter; OWOKOTOMO, Olajumoke Evangelina; MESOTTEN, Liesbet; LOUIS, Evelyne; SHKEDY, Ziv; THOMEER, Michiel; ADRIAENSENS, Peter | Journal Contribution | A1 |
| 34 | 2017 | Applied Surrogate Endpoint Evaluation Methods with SAS and R | ALONSO ABAD, Ariel; BIGIRUMURAME, Theophile; BURZYKOWSKI, Tomasz; BUYSE, Marc; MOLENBERGHS, Geert; MUCHENE, Leacky; PERUALILA, Nolen Joy; SHKEDY, Ziv; VAN DER ELST, Wim | Book | B1 |
| 35 | 2017 | Identification of the minimum effective dose for normally distributed data using a Bayesian variable selection approach | OTAVA, Martin; SHKEDY, Ziv; Hothorn, Ludwig A.; TALLOEN, Willem; Gerhard, Daniel; KASIM, Adetayo | Journal Contribution | A1 |
| 36 | 2017 | Choice of initial antiretroviral drugs and treatment outcomes among HIV-infected patients in sub-Saharan Africa: systematic review and meta-analysis of observational studies | AWOKE AYELE, Tadesse; Worku, A; Kebede, Y; Alemu, K; KASIM, Adetayo; SHKEDY, Ziv | Journal Contribution | A1 |
| 37 | 2017 | Real-time parameter estimation of Zika outbreaks using model averaging | Sebrango-Rodriguez, C. R.; Martinez-Bello, D. A.; Sanchez-Valdes, L.; THILAKARATHNE, Pushpike; DEL FAVA, Emanuele; Van Der Stuyft, P.; Lopez-Quilez, A.; SHKEDY, Ziv | Journal Contribution | A1 |
| 38 | 2017 | A random effects model for the identification of differential splicing (REIDS) using exon and HTA arrays | VAN MOERBEKE, Marijke; KASIM, Adetayo; TALLOEN, Willem; Reumers, Joke; Gohlmann, Hinrick W. H.; SHKEDY, Ziv | Journal Contribution | A1 |
| 39 | 2017 | Willingness to pay for a dengue vaccine and its associated determinants in Indonesia: A community-based, cross-sectional survey in Aceh | Harapan, Harapan; Anwar, Samsul; Bustamam, Aslam; Radiansyah, Arsil; Angraini, Pradiba; Fasli, Riny; Salwiyadi, Salwiyadi; Bastian, Reza Akbar; Oktiviyari, Ade; Akmal, Imaduddin; Iqbalamin, Muhammad; Adil, Jamalul; Henrizal, Fenni; Darmayanti, Darmayanti; Mahmuda, Mahmuda; Mudatsir, Mudatsir; Imrie, Allison; Sasmono, R. Tedjo; Kuch, Ulrich; SHKEDY, Ziv; PRAMANA, Setia | Journal Contribution | A1 |
| 40 | 2017 | Disease severity in patients with visceral leishmaniasis is not altered by co-infection with intestinal parasites | Tajebe, Fitsumbrhan; Getahun, Mulusew; Adem, Emebet; Hailu, Asrat; Lemma, Mulualem; Fikre, Helina; Raynes, John; Tamiru, Aschalew; Mulugeta, Zemenay; Diro, Ermias; Toulza, Frederic; SHKEDY, Ziv; Ayele, Tadesse; Modolell, Manuel; Munder, Markus; Mueller, Ingrid; Takele, Yegnasew; Kropf, Pascale | Journal Contribution | A1 |
| 41 | 2017 | Multi-state models for the analysis of time-to-treatment modification among HIV patients under highly active antiretroviral therapy in Southwest Ethiopia | Birlie, Belay; BRAEKERS, Roel; AWOKE AYELE, Tadesse; KASIM, Adetayo; SHKEDY, Ziv | Journal Contribution | A1 |
| 42 | 2017 | Multiple confidence intervals for selected parameters adjusted for the false coverage rate in monotone dose-response microarray experiments | Peng, Jianan; Liu, Wei; Bretz, Frank; SHKEDY, Ziv | Journal Contribution | A1 |
| 43 | 2017 | IsoGeneGUI: Multiple Approaches for Dose-Response Analysis of Microarray Data Using R | OTAVA, Martin; LIN, Dan; SENGUPTA, Rudradev; SHKEDY, Ziv; PRAMANA, Setia; Verbeke, Tobias; HALDERMANS, Philippe; Hothorn, Ludwig A.; Gerhard, Daniel; Kuiper, Rebecca M.; Klinglmueller, Florian; KASIM, Adetayo | Journal Contribution | A1 |
| 44 | 2016 | Visceral Leishmaniasis Patients Display Altered Composition and Maturity of Neutrophils as well as Impaired Neutrophil Effector Functions | Yizengaw, Endalew; Getahun, Mulusew; Tajebe, Fitsumbrhan; Cervera, Edward Cruz; Adem, Emebet; Mesfin, Getnet; Hailu, Asrat; Van der Auwera, Gert; Yardley, Vanessa; Lemma, Mulualem; SHKEDY, Ziv; Diro, Ermias; Yeshanew, Arega; Melkamu, Roma; Mengesha, Bewketu; Modolell, Manuel; Munder, Markus; Müller, Ingrid; Takele, Yegnasew; Kropf, Pascale | Journal Contribution | A1 |
| 45 | 2016 | A joint modeling approach for uncovering associations between gene expression, bioactivity and chemical structure in early drug discovery to guide lead selection and genomic biomarker development | PERUALILA, Nolen Joy; KASIM, Adetayo; TALLOEN, Willem; Verbist, Bie; Hinrich Ghoelmann; QSTAR Consortium; SHKEDY, Ziv; KHAMIAKOVA, Tatsiana; OTAVA, Martin | Journal Contribution | A1 |
| 46 | 2016 | Malnutrition in Healthy Individuals Results in Increased Mixed Cytokine Profiles, Altered Neutrophil Subsets and Function | Takele, Y.; Adem, E.; Getahun, M.; Tajebe, F.; Kiflie, A.; Hailu, A.; Raynes, J.; Mengesha, B.; Ayele, T. A.; SHKEDY, Ziv; Lemma, M.; Diro, E.; Toulza, F.; Modolell, M.; Munder, M.; Mueller, I.; Kropf, P. | Journal Contribution | A1 |
| 47 | 2016 | The Detection of Metabolite-Mediated Gene Module Co-Expression Using Multivariate Linear Models | PADAYACHEE, Trishanta; KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; Perola, Markus; Salo, Perttu; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 48 | 2016 | Modeling Outcomes of First-Line Antiretroviral Therapy and Rate of CD4 Counts Change among a Cohort of HIV/AIDS Patients in Ethiopia: A Retrospective Cohort Study | Awoke, Tadesse; Worku, Alemayehu; Kebede, Yigzaw; KASIM, Adetayo; Birlie, Belay; BRAEKERS, Roel; Zuma, Khangelani; SHKEDY, Ziv | Journal Contribution | A1 |
| 49 | 2016 | Weighted similarity-based clustering of chemical structures and bioactivity data in early drug discovery | PERUALILA, Nolen Joy; TALLOEN, Willem; SHKEDY, Ziv; Göhlmann, Hinrich W. H.; VAN MOERBEKE, Marijke; KASIM, Adetayo | Journal Contribution | A1 |
| 50 | 2016 | Successful Treatment of Human Visceral Leishmaniasis Restores Antigen-Specific IFN-gamma, but not IL-10 Production | Adem, Emebet; Tajebe, Fitsumbirhan; Getahun, Mulusew; Kiflie, Amare; Diro, Ermias; Hailu, Asrat; SHKEDY, Ziv; Mengesha, Bewketu; Mulaw, Tadele; Atnafu, Saba; Deressa, Tekalign; Mathewos, Biniam; Abate, Ebba; Modolell, Manuel; Munder, Markus; Mueller, Ingrid; Takele, Yegnasew; Kropf, Pascale | Journal Contribution | A1 |
| 51 | 2016 | Detection of Lung Cancer through Metabolic Changes Measured in Blood Plasma | LOUIS, Evelyne; ADRIAENSENS, Peter; GUEDENS, Wanda; BIGIRUMURAME, Theophile; BAETEN, Kurt; VANHOVE, Karolien; Vandeurzen, Kurt; Darquennes, Karen; Vansteenkiste, Johan; Dooms, Christophe; SHKEDY, Ziv; MESOTTEN, Liesbet; THOMEER, Michiel | Journal Contribution | A1 |
| 52 | 2016 | The xMotif algorithm | DE TROYER, Ewoud; LIN, Dan; SHKEDY, Ziv; Kaiser, Sebastian | Book Section | B2 |
| 53 | 2016 | The Plaid Model | SHKEDY, Ziv; DE TROYER, Ewoud; KASIM, Adetayo; Hochreiter, Sepp; Turner, Heather | Book Section | B2 |
| 54 | 2016 | Bimax Algorithm | DE TROYER, Ewoud; VAN SANDEN, Suzy; SHKEDY, Ziv; Kaiser, Sebastian | Book Section | B2 |
| 55 | 2016 | Identification of Local Patterns in the NBA Performance Indicators | SHKEDY, Ziv; SENGUPTA, Rudradev; PERUALILA, Nolen Joy | Book Section | B2 |
| 56 | 2016 | The biclustGUI Shiny App | DE TROYER, Ewoud; SENGUPTA, Rudradev; OTAVA, Martin; Zhang, Jitao David; Kaiser, Sebastian; Culhane, Aedin; Gusenleitner, Daniel; Gestraud, Pierre; Csardi, Gabor; Hochreiter, Sepp; Klambauer, Gunter; Clevert, Djork-Arne; PERUALILA, Nolen Joy; KASIM, Adetayo; SHKEDY, Ziv | Book Section | B2 |
| 57 | 2016 | High-Dimensional Biomarkers in Drug Discovery: The QSTAR Framework | PERUALILA, Nolen Joy; SHKEDY, Ziv; SENGUPTA, Rudradev; BIGIRUMURAME, Theophile; BIJNENS, Luc; Taloen, Willem; Verbist, Bie; Göhlmann, Hinrich W.H.; KASIM, Adetayo | Book Section | B2 |
| 58 | 2016 | Biclustering for Cloud Computing | SENGUPTA, Rudradev; Trelles, Oswaldo; Tirado, Oscar Torreno; SHKEDY, Ziv | Book Section | B2 |
| 59 | 2015 | Integrated analysis of multi-source data in drug discovery experiments using structural equation models | BIGIRUMURAME, Theophile; PERUALILA, Nolen Joy; SHKEDY, Ziv; KASIM, Adetayo | Proceedings Paper | C2 |
| 60 | 2015 | IDENTIFICATION AND CHARACTERIZATION OF LONG TERM SURVIVAL POPULATION IN NON-SMALL-CELL LUNG CANCER PATIENTS TREATED WITH IMMUNOTHERAPIES | Luaces, P.; SANCHEZ, Lizet; Viada, C.; Rodriguez, P. C.; Alvarez, M.; Fonte, C.; MUCHENE, Leacky; SHKEDY, Ziv; Lage, A. | Journal Contribution | M |
| 61 | 2015 | Identification of in vitro and in vivo disconnects using transcriptomic data | OTAVA, Martin; SHKEDY, Ziv; TALLOEN, Willem; Verheyen, Geert R.; KASIM, Adetayo | Journal Contribution | A1 |
| 62 | 2015 | Using transcriptomics to guide lead optimization in drug discovery projects: Lessons learned from the QSTAR project | Verbist, Bie; Klambauer, Günter; Vervoort, Liesbet; TALLOEN, Willem; SHKEDY, Ziv; THAS, Olivier; Bender, Andreas; Göhlmann, Hinrich W. H.; Hochreiter, Sepp; BIGIRUMURAME, Theophile | Journal Contribution | A1 |
| 63 | 2015 | Comparison of Additive and Multiplicative Bayesian Models for Longitudinal Count Data With Overdispersion Parameters: A Simulation Study | AREGAY, Mehreteab; SHKEDY, Ziv; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 64 | 2015 | Translation of disease associated gene signatures across tissues | KASIM, Adetayo; SHKEDY, Ziv; LIN, Dan; VAN SANDEN, Suzy; CORTINAS ABRAHANTES, Jose; Goehlmann, Hinrich W. H.; BIJNENS, Luc; Yekutieli, Dani; Camilleri, Michael; Aerssens, Jeroen; TALLOEN, Willem | Journal Contribution | A1 |
| 65 | 2014 | Preprocessing Microarray Data | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 66 | 2014 | Protein Arrays | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 67 | 2014 | Analysis of Gene Sets | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 68 | 2014 | Microarrays | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 69 | 2014 | A Brief Introduction | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 70 | 2014 | Processing the Scanned Image | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 71 | 2014 | Genomics Basics | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 72 | 2014 | Summarization | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 73 | 2014 | Two-Group Comparative Experiments | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 74 | 2014 | Model-Based Inference and Experimental Design Considerations | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 75 | 2014 | Class Prediction | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 76 | 2014 | Pattern Discovery | Amaratunga, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book Section | B2 |
| 77 | 2014 | Modeling of bioassay data and genes expression in drug discovery experiments: A supervised principal component analysis approach | BIGIRUMURAME, Theophile; PERUALILA, Nolen Joy; SHKEDY, Ziv; KASIM, Adetayo | Conference Material | C2 |
| 78 | 2014 | Development of genetic biomarkers in drug discovery and early drug development experiments | PERUALILA, Nolen Joy; KASIM, Adetayo; TALLOEN, Willem; Goehlmann, Hinrich; SHKEDY, Ziv | Proceedings Paper | C2 |
| 79 | 2014 | Evaluating the effect of immunotherapy in advanced non-small-cell lung cancer patients using two components mixture model | SANCHEZ, Lizet; MUCHENE, Leacky; Luaces, P.; Viada, C.; Rodriguez, P. C.; Frias, A.; SHKEDY, Ziv; Lage, A. | Journal Contribution | M |
| 80 | 2014 | Prediction of gene expression in human using rat in vivo gene expression in Japanese Toxicogenomics Project | OTAVA, Martin; SHKEDY, Ziv; KASIM, Adetayo | Journal Contribution | A1 |
| 81 | 2014 | Dose-Response Modeling Under Simple Order Restrictions Using Bayesian Variable Selection Methods | OTAVA, Martin; SHKEDY, Ziv; Lin, Dan; GOEHLMANN, Hinrich W.H.; BIJNENS, Luc; TALLOEN, Willem; KASIM, Adetayo | Journal Contribution | A1 |
| 82 | 2014 | Non-linear Fractional Polynomials for Estimating Long-Term Persistence of Induced Anti-HPV Antibodies: A Hierarchical Bayesian Approach | AREGAY, Mehreteab; SHKEDY, Ziv; MOLENBERGHS, Geert; David, Marie-Pierre; TIBALDI, Fabian | Journal Contribution | A1 |
| 83 | 2014 | Quality control of Platinum Spike dataset by probe-level mixed models | KHAMIAKOVA, Tatsiana; SHKEDY, Ziv; AMARATUNGA, Dhammika; TALLOEN, Willem; Gohlmann, Hinrich; BIJNENS, Luc; KASIM, Adetayo | Journal Contribution | A1 |
| 84 | 2014 | Modeling multivariate, overdispersed binomial data with additive and multiplicative random effects | DEL FAVA, Emanuele; SHKEDY, Ziv; AREGAY, Mehreteab; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 85 | 2014 | Connecting gene expression data from connectivity map and in silico target predictions for small molecule mechanism-of-action analysis | Ravindranath, Aakash Chavan; PERUALILA, Nolen Joy; KASIM, Adetayo; Drakakis, Georgios; Liggi, Sonia; Brewerton, Suzanne; Mason, Daniel; Bodkin, Michael; Bhagwat, Aditya; TALLOEN, Willem; Gohlmann, Hinrich; Qstar Consortium; SHKEDY, Ziv; Bender, Andreas | Journal Contribution | A1 |
| 86 | 2014 | Exploration and Analysis of DNA Microarray and Other High-Dimensional Data (2nd edition). | AMARATUNGA, Dhammika; Cabrera, Javier; SHKEDY, Ziv | Book | B1 |
| 87 | 2013 | Evaluation of Progression Free Survival as a surrogate for Overall Survival for prostate cancer treatment: Software development | BIGIRUMURAME, Theophile; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; VAN SANDEN, Suzy; THILAKARATHNE, Pushpike; Dries, Joris | Conference Material | C2 |
| 88 | 2013 | aBioMarVsuit: A Biomarker Validation Suit for predicting Survival using gene signature | THILAKARATHNE, Pushpike; SHKEDY, Ziv; OTAVA, Martin; TALLOEN, Willem; BIJNENS, Luc; KASIM, Adetayo | Journal Contribution | A1 |
| 89 | 2013 | The Relationship between Economic Status, Knowledge on Dengue, Risk Perceptions and Practices | Castro, Marta; SANCHEZ, Lizet; Perez, Dennis; SEBRANGO RODRIGUEZ, Carlos; SHKEDY, Ziv; Van der Stuyft, Patrick | Journal Contribution | A1 |
| 90 | 2013 | Simultaneous Mapping of Multiple Gene Loci with Pooled Segregants | CLAESEN, Jurgen; CLEMENT, Lieven; SHKEDY, Ziv; Foulquié-Moreno, Maria R.; BURZYKOWSKI, Tomasz | Journal Contribution | A1 |
| 91 | 2013 | Comparison of methods for the selection of genomic biomarkers | LIN, Dan; Tilahun, Abel; Abrahantes, Jose Cortinas; SHKEDY, Ziv; MOLENBERGHS, Geert; Gohlmann, Hinrich W. H.; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 92 | 2013 | A hierarchical Bayesian approach for the analysis of longitudinal count data with overdispersion: A simulation study | AREGAY, Mehreteab; SHKEDY, Ziv; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 93 | 2013 | Model based estimates of long-term persistence of induced HPV antibodies; a flexible subject-specific approach | AREGAY, Mehreteab; SHKEDY, Ziv; MOLENBERGHS, Geert; David, Marie-Pierre; TIBALDI, Fabian | Journal Contribution | A1 |
| 94 | 2013 | beadarrayFilter: An R Package to Filter Beads | Forcheh, Anyiawung Chiara; VERBEKE, Geert; KASIM, Adetayo; LIN, Dan; SHKEDY, Ziv; TALLOEN, Willem; Goehlmann, Hinrich W. H.; CLEMENT, Lieven | Journal Contribution | A1 |
| 95 | 2013 | A mathematical model for HIV and hepatitis C co-infection and its assessment from a statistical | CASTRO SANCHEZ, Amparo; AERTS, Marc; SHKEDY, Ziv; Vickerman, Peter; Faggiano, Fabrizio; Salamina, Giuseppe; HENS, Niel | Journal Contribution | A1 |
| 96 | 2012 | Adjustment for Multiplicity | Yekutieli, Daniel; LIN, Dan; SHKEDY, Ziv; AMARATUNGA, Dhammika | Book Section | B2 |
| 97 | 2012 | R Package PamGeneMixed: reprocessing and Modeling Kinase Activity Profiles in PamChip Data | THILAKARATHNE, Pushpike; SHKEDY, Ziv; LIN, Dan | Other | O |
| 98 | 2012 | Testing of Equality of Means Against Ordered Alternatives | SHKEDY, Ziv; AMARATUNGA, Dhammika; LIN, Dan | Book Section | B2 |
| 99 | 2012 | Beyond the Simple Order Alternatives | LIN, Dan; SHKEDY, Ziv | Book Section | B2 |
| 100 | 2012 | Estimation and Inference Under Simple Order Restrictions: Hierarchical Bayesian Approach | KASIM, Adetayo; SHKEDY, Ziv; Kato, Bernet S. | Book Section | B2 |
| 101 | 2012 | Bayesian variable selection method for modeling dose-response microarray data under simple order restrictions | OTAVA, Martin; KASIM, Adetayo; SHKEDY, Ziv; LIN, Dan; Kato, Bernet | Proceedings Paper | C2 |
| 102 | 2012 | Simultaneous Inferences for Ratio Parameters Using Multiple Contrasts Test | LIN, Dan; Djira, Gemechis D.; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Hothorn, Ludwig A. | Book Section | B2 |
| 103 | 2012 | Model-Based Approaches | PRAMANA, Setia; SHKEDY, Ziv; Gohlmann, Hinrich W.H.; TALLOEN, Willem; De Bondt, An; STRAETEMANS, Roel; LIN, Dan; Pinheiro, José | Book Section | B2 |
| 104 | 2012 | Modeling Dose-response Microarray Data in Early Drug Development Experiments Using R: Order Restricted Analysis of Microarray Data | LIN, Dan; SHKEDY, Ziv; Yekutieli, D.; AMARATUNGA, Dhammika; BIJNENS, Luc | Book | B1 |
| 105 | 2012 | Single Contrast Tests | Lin, Dan; SHKEDY, Ziv; Yekutieli, Daniel; BURZYKOWSKI, Tomasz; Göhlmann, Hinrich W.H.; De Bondt, An; Verbeke, Tobias; BIJNENS, Luc | Book Section | B2 |
| 106 | 2012 | Significance Analysis of Dose-response Microarray Data | LIN, Dan; SHKEDY, Ziv; Gohlmann, H..; De Bondt, An; BIJNENS, Luc; AMARATUNGA, Dhammika; TALLOEN, Willem | Book Section | B2 |
| 107 | 2012 | Estimation Under Order Restrictions | SHKEDY, Ziv; AMARATUNGA, Dhammika; AERTS, Marc | Book Section | B2 |
| 108 | 2012 | Classification of Monotone Gene Profiles Using Information Theory Selection Methods | LIN, Dan; SHKEDY, Ziv; AERTS, Marc | Book Section | B2 |
| 109 | 2012 | Towards measles elimination in Italy: Monitoring herd immunity by Bayesian mixture modelling of serological data | DEL FAVA, Emanuele; SHKEDY, Ziv; Bechini, Angela; Bonanni, Paolo; Manfredi, Piero | Journal Contribution | A1 |
| 110 | 2012 | Estimating the population prevalence and force of infection directly from antibody titres | BOLLAERTS, Kaatje; AERTS, Marc; SHKEDY, Ziv; FAES, Christel; Van der Stede, Y.; Beutels, P.; HENS, Niel | Journal Contribution | A1 |
| 111 | 2012 | Gene Filtering in the Analysis of Illumina Microarray Experiments | Forcheh, Anyiawung Chiara; VERBEKE, Geert; KASIM, Adetayo; LIN, Dan; SHKEDY, Ziv; TALLOEN, Willem; Goehlmann, Hinrich W. H.; CLEMENT, Lieven | Journal Contribution | A1 |
| 112 | 2012 | Testing the Effectiveness of Community-Based Dengue Vector Control Interventions Using Semiparametric Mixed Models | SANCHEZ, Lizet; MARINGWA, John; SHKEDY, Ziv; Castro, Marta; Carbonell, Nestor; Van der Stuyft, Patrick | Journal Contribution | A1 |
| 113 | 2012 | Estimating the force of infection for HCV in injecting drug users using interval-censored data | CASTRO SANCHEZ, Amparo; SHKEDY, Ziv; HENS, Niel; AERTS, Marc; Geskus, R.; Prins, M.; Wiessing, L.; Kretzschmar, M. | Journal Contribution | A1 |
| 114 | 2012 | GENOMIC BIOMARKERS FOR A BINARY CLINICAL OUTCOME IN EARLY DRUG DEVELOPMENT MICROARRAY EXPERIMENTS | VAN SANDEN, Suzy; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Gohlmann, Hinrich W. H.; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 115 | 2012 | Modeling Infectious Disease Parameters Based on Serological and Social Contact Data: A Modern Statistical Perspective | HENS, Niel; SHKEDY, Ziv; AERTS, Marc; FAES, Christel; Van Damme, Pierre; Beutels, Philippe | Book | B1 |
| 116 | 2011 | High prevalence of F4(+) and F18(+) Escherichia coli in Cuban piggeries as determined by serological survey | de la Fe Rodriguez, Pedro Yoelvys; Coddens, Annelies; DEL FAVA, Emanuele; CORTINAS ABRAHANTES, Jose; SHKEDY, Ziv; Maroto Martin, Luis O.; Cruz Munoz, Eduardo; DUCHATEAU, Luc; Cox, Eric; Goddeeris, Bruno Maria | Journal Contribution | A1 |
| 117 | 2011 | A frequentist approach to estimating the force of infection for a respiratory disease using repeated measurement data from a birth cohort | Mwambi, H.; Ramroop, S.; White, L. J.; Okiro, E. A.; Nokes, D. J.; SHKEDY, Ziv; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 118 | 2011 | A frequentist approach to estimating the force of infection and the recovery rate for a respiratory disease among infants in coastal Kenya | Mwambi, H.; Ramroop, S.; White, L.J.; Okiro, E.A.; Nokes, D.J.; SHKEDY, Ziv; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 119 | 2011 | Reproduction number, turning point, total number of cases and impact of interventions during dengue outbreak in Playa municipality, La Habana city | SANCHEZ, Lizet; Sebrango, C.; Abad, Y.; Pelaez, O.; SHKEDY, Ziv; Van der Stuyft, P. | Journal Contribution | M |
| 120 | 2011 | The use of semiparametric mixed models to analyze PamChip® peptide array data: an application to an oncology experiment | THILAKARATHNE, Pushpike; CLEMENT, Lieven; LIN, Dan; SHKEDY, Ziv; KASIM, Adetayo; TALLOEN, Willem; Versele, Matthias; VERBEKE, Geert | Journal Contribution | A1 |
| 121 | 2011 | Revealing age-specific past and future unrelated costs of pneumococcal infections by flexible generalized estimating equations | CREEMERS, An; AERTS, Marc; HENS, Niel; SHKEDY, Ziv; De Smet, Frank; Beutels, Philippe | Journal Contribution | A1 |
| 122 | 2011 | Joint Modeling of HCV and HIV Infections among Injecting Drug Users in Italy Using Repeated Cross-Sectional Prevalence Data | DEL FAVA, Emanuele; KASIM, Adetayo; Muhammed, Usman; SHKEDY, Ziv; HENS, Niel; AERTS, Marc; BOLLAERTS, Kaatje; Scalia Tomba, Gianpaolo; Vickerman, Peter; Sutton, Andrew J.; Wiessing, Lucas; Kretzschmar, Mirjam | Journal Contribution | A1 |
| 123 | 2010 | FABIA: factor analysis for bicluster acquisition | Hochreiter, Sepp; Bodenhofer, Ulrich; Heusel, Martin; Mayr, Andreas; Mitterecker, Andreas; KASIM, Adetayo; KHAMIAKOVA, Tatsiana; VAN SANDEN, Suzy; LIN, Dan; Talloen, Willem; BIJNENS, Luc; Gohlmann, Hinrich W. H.; SHKEDY, Ziv; Clevert, Djork-Arne | Journal Contribution | A1 |
| 124 | 2010 | Informative or Noninformative Calls for Gene Expression: A Latent Variable Approach | KASIM, Adetayo; LIN, Dan; VAN SANDEN, Suzy; Clevert, Djork-Arne; BIJNENS, Luc; Goehlmann, Hinrich; AMARATUNGA, Dhammika; Hochreiter, Sepp; SHKEDY, Ziv; TALLOEN, Willem | Journal Contribution | A1 |
| 125 | 2010 | Genomic Biomarkers for Depression: Feature-Specific and Joint Biomarkers | TILAHUN ESHETE, Abel; LIN, Dan; SHKEDY, Ziv; GEYS, Helena; ALONSO ABAD, Ariel; Peeters, Pieter; TALLOEN, Willem; Drinkenburg, Wilhelmus; Goehlmann, Hinrich; Gorden, Evian; BIJNENS, Luc; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 126 | 2010 | Estimating infectious disease parameters from data on social contacts and serological status | GOEYVAERTS, Nele; HENS, Niel; OGUNJIMI, Benson; AERTS, Marc; SHKEDY, Ziv; Van Damme, Pierre; Beutels, Philippe | Journal Contribution | A1 |
| 127 | 2010 | Seventy-five years of estimating the force of infection from current status data | HENS, Niel; AERTS, Marc; FAES, Christel; SHKEDY, Ziv; Lejeune, O.; van Damme, P.; Beutels, P. | Journal Contribution | A1 |
| 128 | 2010 | Testing the effectiveness of dengue vector control interventions | SANCHEZ, Lizet; MARINGWA, John; SHKEDY, Ziv; Castro, M.; Carbonell, N.; Van der Stuyft, P. | Journal Contribution | M |
| 129 | 2009 | Multiple contrast test for detecting monotonic dose-response relationship and FDR-adjusted confidence intervals for selected parameters in a microarray Setting | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Yekutieli, D.; De Bondt, A.; Göhlmann, WHH.; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 130 | 2009 | A Comparison of Procedures for Controlling the False Discovery Rate in the Presence of Small Variance Genes: A Simulation Study | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; TALLOEN, Willem; BIJNENS, Luc | Journal Contribution | A1 |
| 131 | 2009 | Contact patterns and their implied basic reproductive numbers: an illustration for varicella-zoster virus | VAN EFFELTERRE, Thierry; SHKEDY, Ziv; AERTS, Marc; MOLENBERGHS, Geert; Van Damme, P.; Beutels, P. | Journal Contribution | A1 |
| 132 | 2009 | Mining social mixing patterns for infectious disease models based on a two-day population survey in Belgium | HENS, Niel; GOEYVAERTS, Nele; AERTS, Marc; SHKEDY, Ziv; Van Damme, P; Beutels, Ph. | Journal Contribution | A1 |
| 133 | 2009 | Intersectoral coordination, community empowerment and dengue prevention: six years of controlled interventions in Playa Municipality, Havana, Cuba | SANCHEZ, Lizet; Perez, D.; Cruz, G.; Castro, M.; Kouri, G.; SHKEDY, Ziv; Vanlerberghe, V.; Van der Stuyft, P. | Journal Contribution | A1 |
| 134 | 2008 | Application of Semiparametric Mixed Models and Simultaneous Confidence Bands in a Cardiovascular Safety Experiment with Longitudinal Data | MARINGWA, John; GEYS, Helena; SHKEDY, Ziv; FAES, Christel; MOLENBERGHS, Geert; AERTS, Marc; Van Ammel, Karel; Teisman, Ard; BIJNENS, Luc | Journal Contribution | A1 |
| 135 | 2008 | Information theory based marker evaluation | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; AERTS, Marc; Göhlmann, H.W.H.; De Bondt, A.; Perera, T.; Geerts, T.; Van den Wyngaert, I.; BIJNENS, Luc | Proceedings Paper | C2 |
| 136 | 2008 | Analysis of cross-over designs with serial correlation within periods using semi-parametric mixed models | MARINGWA, John; Geys, Helena; SHKEDY, Ziv; FAES, Christel; MOLENBERGHS, Geert; AERTS, Marc; Van Ammel, Karel; Teisman, Ard; BIJNENS, Luc | Journal Contribution | A1 |
| 137 | 2008 | An Investigation on Performance of Significance Analysis of Microarray (SAM) for the Comparisons of Several Treatments with one Control in the Presence of Small-variance Genes | LIN, Dan; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; Ion, R.; Goehlmann, H.W.H.; De Bondt, A.; Perera, T.; Geerts, T.; Van den Wyngaert, I.; BIJNENS, Luc | Proceedings Paper | C1 |
| 138 | 2008 | Estimating the impact of vaccination using age-time dependent incidence rates of hepatitis B | HENS, Niel; AERTS, Marc; SHKEDY, Ziv; KIMANI, Peter Kung'U; KOJOUHOROVA, Mira; VAN DAMME, Pierre; Beutels, P. | Journal Contribution | A1 |
| 139 | 2008 | Modelling multisera data: The estimation of new joint and conditional epidemiological parameters | HENS, Niel; AERTS, Marc; SHKEDY, Ziv; Theeten, H.; Van Damme, P.; Beutels, P. | Journal Contribution | A1 |
| 140 | 2008 | Parvovirus B19 infection in five European countries: seroepidemiology, force of infection and maternal risk of infection | Mossong, J.; HENS, Niel; Friederichs, V.; Davidkin, I.; Broman, M.; Litwinska, A.; Siennicka, J.; Trzcinska, A.; Van Damme, P.; Beutels, P.; Vyse, A.; SHKEDY, Ziv; AERTS, Marc; Massari, M.; Gabutti, G. | Journal Contribution | A1 |
| 141 | 2008 | A Cross-Validation Study to Select a Classification Procedure for Clinical Diagnosis Based on Proteomic Mass Spectrometry | VALKENBORG, Dirk; VAN SANDEN, Suzy; LIN, Dan; KASIM, Adetayo; JANSEN, Ivy; SHKEDY, Ziv; BURZYKOWSKI, Tomasz; HALDERMANS, Philippe; ZHU, Qi | Journal Contribution | A1 |
| 142 | 2008 | Alternative methods to evaluate trial level surrogacy | CORTINAS ABRAHANTES, Jose; SHKEDY, Ziv; MOLENBERGHS, Geert | Journal Contribution | A1 |
| 143 | 2007 | A comparison of heterogeneity in the acquisition of varicella zoster virus and parvovirus B19 for five different European countries. | HENS, Niel; GAY, Nigel; SHKEDY, Ziv; AERTS, Marc; EDMUNDS, John | Journal Contribution | M |
| 144 | 2007 | Estimating stellar parameters from spectra using a hierarchical Bayesian approach | SHKEDY, Ziv; Decin, L.; MOLENBERGHS, Geert; AERTS, Conny | Journal Contribution | A1 |
| 145 | 2007 | Handling missingness when modeling the force of infection from clustered seroprevalence data | HENS, Niel; FAES, Christel; AERTS, Marc; SHKEDY, Ziv; Mintiens, Koen; LAEVENS, Hans; BOELAERT, Frank | Journal Contribution | A1 |
| 146 | 2007 | Estimation of the force of infection from current status data using generalized linear mixed models | NAMATA, Harriet; SHKEDY, Ziv; FAES, Christel; AERTS, Marc; MOLENBERGHS, Geert; Theeten, Heide; Van Damme, Pierre; Beutels, Phillipe | Journal Contribution | A1 |
| 147 | 2007 | Testing for trends in dose-response microarray experiments: A comparison of several testing procedures, multiplicity and resampling-based inference | LIN, Dan; SHKEDY, Ziv; Yekutieli, Dani; BURZYKOWSKI, Tomasz; Goehlmann, Hinrich W. H.; De Bondt, An; Perera, Tim; Geerts, Tamara; BIJNENS, Luc | Journal Contribution | A1 |
| 148 | 2007 | Using linear mixed models for normalization of cDNA Microarrays | HALDERMANS, Philippe; SHKEDY, Ziv; VAN SANDEN, Suzy; BURZYKOWSKI, Tomasz; AERTS, Marc | Journal Contribution | A1 |
| 149 | 2006 | Differential early onset of therapeutic response with risperidone vs conventional antipsychotics in patients with chronic schizophrenia | Glick, Ira D.; SHKEDY, Ziv; Schreiner, Andreas | Journal Contribution | A1 |
| 150 | 2006 | Estimating herd-specific force of infection by using random-effects models for clustered binary data and monotone fractional polynomials | FAES, Christel; HENS, Niel; AERTS, Marc; SHKEDY, Ziv; GEYS, Helena; Mintiens, K.; Laevens, H; Boelaert, F | Journal Contribution | A1 |
| 151 | 2006 | Seroepidemiology of diphtheria and pertussis in Luxembourg in 2000 | Mossong, J; Putz, L; SHKEDY, Ziv; Schneider, F | Journal Contribution | A1 |
| 152 | 2006 | Social mixing patterns for transmission models of close contact infections: exploring self-evaluation and diary-based data collection through a web-based interface | Beutels, P; SHKEDY, Ziv; AERTS, Marc; Van Damme, P | Journal Contribution | A1 |
| 153 | 2006 | Modelling age-dependent force of infection from prevalence data using fractional polynomials | SHKEDY, Ziv; AERTS, Marc; MOLENBERGHS, Geert; Beutels, Phillipe; Van Damme, Pierre | Journal Contribution | A1 |
| 154 | 2006 | The Weight of Euro Coins: Its Distribution Might Not Be As Normal As You Would Expect | SHKEDY, Ziv; AERTS, Marc; CALLAERT, Herman | Journal Contribution | A1 |
| 155 | 2006 | Evidence for a substantial role of sharing of injecting paraphernalia other than syringes/needles to the spread of hepatitis C among injecting drug users | Mathei, Catharina; SHKEDY, Ziv; Denis, B; Kabali, C; AERTS, Marc; MOLENBERGHS, Geert; Van Damme, P; Buntinx, F | Journal Contribution | A1 |
| 156 | 2005 | Bayesian evaluation of surrogate endpoints | SHKEDY, Ziv; TORRES BARBOSA, Franz | Book Section | B2 |
| 157 | 2005 | Seroepidemiology of diphtheria and pertussis in Luxemburg in 2000 | Mossong, J.; Putz, L.; SHKEDY, Ziv; Schneider, F. | Journal Contribution | A2 |
| 158 | 2005 | Modelling the Herd-specific force of infection for BoHV-1: the influence of missing data | HENS, Niel; FAES, Christel; AERTS, Marc; SHKEDY, Ziv; GEYS, Helena; Mintiens, K.; Laevens, H; Boelaert, F | Proceedings Paper | C2 |
| 159 | 2005 | Behavioral testing of antidepressant compounds: An analysis of crossover design for correlated binary data | SHKEDY, Ziv; VANDERSMISSEN, Veerle; MOLENBERGHS, Geert; Van Craenendonck, H; Aerts, Nancy; Steckler, T; BIJNENS, Luc | Journal Contribution | A1 |
| 160 | 2005 | Modeling anti-KLH ELISA data using two-stage and mixed effects models in support of immunotoxicological studies | SHKEDY, Ziv; STRAETEMANS, Roel; MOLENBERGHS, Geert; Desmidt, Miek; Vinken, Petra; Goeminne, Nick; Coussement, Werner; Van den Poel, Bob; BIJNENS, Luc | Journal Contribution | A1 |
| 161 | 2005 | A hierarchical binomial-poisson model for the analysis of a crossover design for correlated binary data when the number of trials is dose-dependent | SHKEDY, Ziv; MOLENBERGHS, Geert; Van Craenendonck, Hansfried; BIJNENS, Luc; Steckler, Thomas | Journal Contribution | A1 |
| 162 | 2004 | Prentice's approach and the meta-analytic paradigm: a reflection on the role of statistics in the evaluation of surrogate endpoints | ALONSO ABAD, Ariel; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; RENARD, Didier; GEYS, Helena; SHKEDY, Ziv; TIBALDI, Fabian; CORTINAS ABRAHANTES, Jose; BUYSE, Marc | Journal Contribution | A1 |
| 163 | 2004 | Estimating stellar parameters from spectra - 1. Goodness-of-fit parameters and lack-of-fit test | SHKEDY, Ziv; Decin, L.; MOLENBERGHS, Geert; AERTS, Marc; AERTS, Conny | Journal Contribution | A1 |
| 164 | 2004 | Choice of units of analysis and modeling strategies in multilevel hierarchical models | CORTINAS ABRAHANTES, Jose; MOLENBERGHS, Geert; BURZYKOWSKI, Tomasz; SHKEDY, Ziv; ALONSO ABAD, Ariel; RENARD, Didier | Journal Contribution | A1 |
| 165 | 2003 | Flexible statistical modelling: application to infectious diseases and astronomical data | SHKEDY, Ziv | Theses and Dissertations | T1 |
| 166 | 2003 | A hierarchical Bayesian approach for the evaluation of surrogate endpoints in multiple randomized clinical trials | SHKEDY, Ziv; TORRES BARBOSA, Franz; BURZYKOWSKI, Tomasz; MOLENBERGHS, Geert | Proceedings Paper | C2 |
| 167 | 2003 | Heterogeneity of symptom pattern, psychosocial factors, and pathophysiological mechanisms in severe functional dyspepsia | Fischler, Benjamin; Tack, Jan; De Gucht, Véronique; SHKEDY, Ziv; Persoons, Philippe; Broekaert, Dorine; MOLENBERGHS, Geert; JANSSEN, Jo | Journal Contribution | A1 |
Loading...
5
0
5
0
false